| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498632
Identifier: 34498632
GI number: 34498632
Start: 3458516
End: 3458956
Strand: Reverse
Name: 34498632
Synonym: CV_3177
Alternate gene names: NA
Gene position: 3458956-3458516 (Counterclockwise)
Preceding gene: 34498633
Following gene: 34498626
Centisome position: 72.8
GC content: 71.66
Gene sequence:
>441_bases ATGAGCACCACCGCGCTGATCCTGCCGGTGCGCAACGCCGGCCCTCATCTCGACCGGCTGTTGTTCGGCGGCGTGCTGTC GCCCCGGGGACTGGCGGCCGGGCCCTTGCCGGCGCTGCTGGCCTGCTATGCGCCGGGGCTGGTGTTCGGCGGCTGGAACG GATTGCTGGCGCGTTATTTCTATGCCGGCGGCGATACCCGCACCCCCCTGGCCTTTGAACTGGCAGGGAGCGCCTTGCAG GCCGGCGCGCTGCTTTCCTCCCGCGCCGGGCATGGCTTGGGCCCCGAGCTGATGCGCATGGGCGGTTGGACCTCGCTGGC CGCTGTCCTCTGCGCCGGCTGGCTGTTTCCGCTGGATGGTACCTGGCGGCAGCTGGGCGCCGCATCGGCTTGCGGTGCGG CGGCGATGGCCATCCTGGCATGGCGTGCGCGACGGCGTTGA
Upstream 100 bases:
>100_bases TGATCGATCTGGTGATGATAGAGGTTCAGAGCGGCGACTACCTCGGCGAGGACGACATCGTCCGCTTCTCCGACCATTAC GGCCGCTCGGAGAGCGCCGG
Downstream 100 bases:
>100_bases GCCGCCGGCCAAGCTTCCCAGGGCCGGAGCGCGCCGGCACGGAAGCTTGTCGGCGCAGGGCAGGGGGCGCCTGCGGTGTT CAATGAATGGTCCCGCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSTTALILPVRNAGPHLDRLLFGGVLSPRGLAAGPLPALLACYAPGLVFGGWNGLLARYFYAGGDTRTPLAFELAGSALQ AGALLSSRAGHGLGPELMRMGGWTSLAAVLCAGWLFPLDGTWRQLGAASACGAAAMAILAWRARRR
Sequences:
>Translated_146_residues MSTTALILPVRNAGPHLDRLLFGGVLSPRGLAAGPLPALLACYAPGLVFGGWNGLLARYFYAGGDTRTPLAFELAGSALQ AGALLSSRAGHGLGPELMRMGGWTSLAAVLCAGWLFPLDGTWRQLGAASACGAAAMAILAWRARRR >Mature_145_residues STTALILPVRNAGPHLDRLLFGGVLSPRGLAAGPLPALLACYAPGLVFGGWNGLLARYFYAGGDTRTPLAFELAGSALQA GALLSSRAGHGLGPELMRMGGWTSLAAVLCAGWLFPLDGTWRQLGAASACGAAAMAILAWRARRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15075; Mature: 14944
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTALILPVRNAGPHLDRLLFGGVLSPRGLAAGPLPALLACYAPGLVFGGWNGLLARYF CCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEECCHHHHHHHHH YAGGDTRTPLAFELAGSALQAGALLSSRAGHGLGPELMRMGGWTSLAAVLCAGWLFPLDG HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCC TWRQLGAASACGAAAMAILAWRARRR HHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STTALILPVRNAGPHLDRLLFGGVLSPRGLAAGPLPALLACYAPGLVFGGWNGLLARYF CCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEECCHHHHHHHHH YAGGDTRTPLAFELAGSALQAGALLSSRAGHGLGPELMRMGGWTSLAAVLCAGWLFPLDG HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCC TWRQLGAASACGAAAMAILAWRARRR HHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA