| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498626
Identifier: 34498626
GI number: 34498626
Start: 3454465
End: 3455127
Strand: Reverse
Name: 34498626
Synonym: CV_3171
Alternate gene names: NA
Gene position: 3455127-3454465 (Counterclockwise)
Preceding gene: 34498632
Following gene: 34498624
Centisome position: 72.72
GC content: 73.6
Gene sequence:
>663_bases GTGACGGCATTTCGGCGGGTTCGCTCATGCGCAGCGCCGTTCCCGCCAGGCGGTAGCCCATGCGGTTGCTGCGCGGAGTC AGTTGCCAGGGATGGCCCCACAAGCGCTGGCGGTCCGGCTTGGACAGCCACGCGTATTCCGGGCCGGCGCAGACGCGGAT CCGGTTGCCGGGCCGCGGCAGCCAGACGCCCAGCCGGGGACGCGGCGGCCGCGCTTCTCCCAGCGGCAGGCGGTCGCCGT CGCGCAGCGCGCGGCCTAAGTGGCCGCCGAAGCCGGCCATCAGGTCGGTGCTGGCAGATTCCATCAGCAAGGGCACGGCG ATGCCGCCATCCACAGCCAGGTAGGCGCGCATGCCGCTCCGTGGCGCTTCCAGCTTCAATACCTGGCCGGCGCGGAAAGC GGTGCGCCAGCCCGGGAAAACCGGTTCGCCGTCCAGCGTGGCGCGGCAGTCGGCGCCCGCCAGCGCCAGCATGCCGCCGC GCAGCAAGCGGAAACAGGCCGGCGGTAGCGCGATTTCCAGCGCCGCGGCCCCGGCCGGGTTGCCCGCCAGCCGGTTGGCC ACGGTCAGCGCCAGCGCGTCCATCGTGCCGGCGCGGCACACGCCCAGATGGCGGACGCCGAAACGGCCCAGGTCCTGCAC CGTGGTCTGTGGGCCGGCCTTGA
Upstream 100 bases:
>100_bases ATGCCCAGCCGCGGATAGCCGCCGGTGGCCTGGGCGTCGGCCATCAGCACGATGGGCTGGCCGTCCGGAGGCAGCTGGAT CAGGCCGGGCAAGGCGCCGT
Downstream 100 bases:
>100_bases TCACCTCCAGCATCAGGCGTCCTCCATCGGTACGAAGCGCACGATATCGCCGGGCCGCAGCGGGCAGGGCGGCTGTCGCG AAGGATCGAACAGCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTAFRRVRSCAAPFPPGGSPCGCCAESVARDGPTSAGGPAWTATRIPGRRRRGSGCRAAAARRPAGDAAAALLPAAGGRR RAARGLSGRRSRPSGRCWQIPSARARRCRHPQPGRRACRSVALPASIPGRRGKRCASPGKPVRRPAWRGSRRPPAPACRR AASGNRPAVARFPAPRPRPGCPPAGWPRSAPARPSCRRGTRPDGGRRNGPGPAPWSVGRP
Sequences:
>Translated_220_residues MTAFRRVRSCAAPFPPGGSPCGCCAESVARDGPTSAGGPAWTATRIPGRRRRGSGCRAAAARRPAGDAAAALLPAAGGRR RAARGLSGRRSRPSGRCWQIPSARARRCRHPQPGRRACRSVALPASIPGRRGKRCASPGKPVRRPAWRGSRRPPAPACRR AASGNRPAVARFPAPRPRPGCPPAGWPRSAPARPSCRRGTRPDGGRRNGPGPAPWSVGRP >Mature_219_residues TAFRRVRSCAAPFPPGGSPCGCCAESVARDGPTSAGGPAWTATRIPGRRRRGSGCRAAAARRPAGDAAAALLPAAGGRRR AARGLSGRRSRPSGRCWQIPSARARRCRHPQPGRRACRSVALPASIPGRRGKRCASPGKPVRRPAWRGSRRPPAPACRRA ASGNRPAVARFPAPRPRPGCPPAGWPRSAPARPSCRRGTRPDGGRRNGPGPAPWSVGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23061; Mature: 22930
Theoretical pI: Translated: 12.78; Mature: 12.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFRRVRSCAAPFPPGGSPCGCCAESVARDGPTSAGGPAWTATRIPGRRRRGSGCRAAA CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHH ARRPAGDAAAALLPAAGGRRRAARGLSGRRSRPSGRCWQIPSARARRCRHPQPGRRACRS HCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCHHHHHHHH VALPASIPGRRGKRCASPGKPVRRPAWRGSRRPPAPACRRAASGNRPAVARFPAPRPRPG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCC CPPAGWPRSAPARPSCRRGTRPDGGRRNGPGPAPWSVGRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAFRRVRSCAAPFPPGGSPCGCCAESVARDGPTSAGGPAWTATRIPGRRRRGSGCRAAA CHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHH ARRPAGDAAAALLPAAGGRRRAARGLSGRRSRPSGRCWQIPSARARRCRHPQPGRRACRS HCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCHHHHHHHH VALPASIPGRRGKRCASPGKPVRRPAWRGSRRPPAPACRRAASGNRPAVARFPAPRPRPG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCC CPPAGWPRSAPARPSCRRGTRPDGGRRNGPGPAPWSVGRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA