| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is manC [H]
Identifier: 34498633
GI number: 34498633
Start: 3458953
End: 3460395
Strand: Reverse
Name: manC [H]
Synonym: CV_3178
Alternate gene names: 34498633
Gene position: 3460395-3458953 (Counterclockwise)
Preceding gene: 34498634
Following gene: 34498632
Centisome position: 72.83
GC content: 66.32
Gene sequence:
>1443_bases CTGATCCCCTGCATCCTGTCCGGAGGGGCCGGCACCCGGTTGTGGCCGGTTTCGCGAATGGAGTTGCCCAAGCCTTTCAT CCGGATGGCGGATGGCCACAGCCTGTTGCAGAAGACCTTTCAACGCGCGGCCCGCTTGCCGGGAGTACGCCGCGTCATGG CGGTCACCAATCAACAGGCGATGTTCCGGACCCTGGAAGAGTGCAGCGAGGTCAACGAACGCCAGTTGGCGCTGGAGTTG CTGCTGGAGCCGGCGGGACGCAACACCGCCCCGGCCATCGCCGCAGCGGCGCTGGACATGCTGGAGAGGCAGGAAGGGAG CGAGGCCATTCTGCTGGTGCTGCCGGCCGATCATCTGGTGACCGACGAAGAGGCATTCGCCGCGGCAGTCCAGGAAGCCT GGGAGCTGGCCGAGGCGGGGCGCATCGTCGCCTTCGGCCTCAAGCCTAGCCGGCCGGAAACCGGCTTCGGCTACATCGAG CAGGGGGAGCCGCTCGCCGGAAAGGGTTTTGAGGTGGCGCGTTTCGTCGAAAAGCCGGACGCCGCCGCCGCGCAAGCCTA TCTGGACGACGGGCGCTACTGGTGGAACAGCGGGATGTTGTGCTTTTCCGCCTTGGTCATGTGCGATGCGTTGGCGCGGC TAGCGCCGGAGGTGCTGGATGGCGTGGAGGCCTGCTTGAGGGCGAGCCCCTGCCTGAGCGGGGCAGGGCGGCGACAACGC GAGCTGGACAAGGCGAGCTTCGCCTTGTGTCCGGACATTTCCATCGATTACGCGGTGATGGAAAAGACCGACAACGCCGC CGTGGTGCCCTGCGACCTTGGATGGAGCGACATCGGCAATTGGGACAGCCTGATGGGCGAGTTTCCCGCCGATGGCAACG GCAACAGCAGCTCGGGGGAGGTGCTGCTGTGCGATACCCGCCGGAGCTTCGTGCAAAGCCGGGGGCGCCTGATCGCCACG CTGGGCGTGGACGATCTGCTGATCATCGACACCCCGGACGCCTTGCTGGTGGCGGACCGCAAGCGCAGCCAGGATGTGCG GGACATCGTCGCCGAGCTGAAGCGGCGCGGCCACCCGGCCTATCTGCAGCACCGCACTTCGCAGCGACCCTGGGGGCACT ACACGGTGCTGGAGGATGGCCCGCGCTACAAGATCAAGCGCATTGTGGTGAAGCCCGGGGCCACGCTGTCGCTGCAGATG CACCACCACCGCAGCGAGCACTGGGTGGTGGTGAGCGGCACCGCGCTGGTGGTCAACGGCGAGGACGAGAAGCTGGTCCA CTGCAATGAATCCACCTTCATCCCGGCCGGTGTCAGGCACCGGGTGGCCAATCCGGGCGTGATCGATCTGGTGATGATAG AGGTTCAGAGCGGCGACTACCTCGGCGAGGACGACATCGTCCGCTTCTCCGACCATTACGGCCGCTCGGAGAGCGCCGGA TGA
Upstream 100 bases:
>100_bases TACAAGTTCCGCTCCATGTACGCGGACAAGACCGATCACGACCCCGCAGTGATTTCAACCGAAGCAGCCTATTGAGACGG CAAGCATGGCAAACACAGAA
Downstream 100 bases:
>100_bases GCACCACCGCGCTGATCCTGCCGGTGCGCAACGCCGGCCCTCATCTCGACCGGCTGTTGTTCGGCGGCGTGCTGTCGCCC CGGGGACTGGCGGCCGGGCC
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MIPCILSGGAGTRLWPVSRMELPKPFIRMADGHSLLQKTFQRAARLPGVRRVMAVTNQQAMFRTLEECSEVNERQLALEL LLEPAGRNTAPAIAAAALDMLERQEGSEAILLVLPADHLVTDEEAFAAAVQEAWELAEAGRIVAFGLKPSRPETGFGYIE QGEPLAGKGFEVARFVEKPDAAAAQAYLDDGRYWWNSGMLCFSALVMCDALARLAPEVLDGVEACLRASPCLSGAGRRQR ELDKASFALCPDISIDYAVMEKTDNAAVVPCDLGWSDIGNWDSLMGEFPADGNGNSSSGEVLLCDTRRSFVQSRGRLIAT LGVDDLLIIDTPDALLVADRKRSQDVRDIVAELKRRGHPAYLQHRTSQRPWGHYTVLEDGPRYKIKRIVVKPGATLSLQM HHHRSEHWVVVSGTALVVNGEDEKLVHCNESTFIPAGVRHRVANPGVIDLVMIEVQSGDYLGEDDIVRFSDHYGRSESAG
Sequences:
>Translated_480_residues MIPCILSGGAGTRLWPVSRMELPKPFIRMADGHSLLQKTFQRAARLPGVRRVMAVTNQQAMFRTLEECSEVNERQLALEL LLEPAGRNTAPAIAAAALDMLERQEGSEAILLVLPADHLVTDEEAFAAAVQEAWELAEAGRIVAFGLKPSRPETGFGYIE QGEPLAGKGFEVARFVEKPDAAAAQAYLDDGRYWWNSGMLCFSALVMCDALARLAPEVLDGVEACLRASPCLSGAGRRQR ELDKASFALCPDISIDYAVMEKTDNAAVVPCDLGWSDIGNWDSLMGEFPADGNGNSSSGEVLLCDTRRSFVQSRGRLIAT LGVDDLLIIDTPDALLVADRKRSQDVRDIVAELKRRGHPAYLQHRTSQRPWGHYTVLEDGPRYKIKRIVVKPGATLSLQM HHHRSEHWVVVSGTALVVNGEDEKLVHCNESTFIPAGVRHRVANPGVIDLVMIEVQSGDYLGEDDIVRFSDHYGRSESAG >Mature_480_residues MIPCILSGGAGTRLWPVSRMELPKPFIRMADGHSLLQKTFQRAARLPGVRRVMAVTNQQAMFRTLEECSEVNERQLALEL LLEPAGRNTAPAIAAAALDMLERQEGSEAILLVLPADHLVTDEEAFAAAVQEAWELAEAGRIVAFGLKPSRPETGFGYIE QGEPLAGKGFEVARFVEKPDAAAAQAYLDDGRYWWNSGMLCFSALVMCDALARLAPEVLDGVEACLRASPCLSGAGRRQR ELDKASFALCPDISIDYAVMEKTDNAAVVPCDLGWSDIGNWDSLMGEFPADGNGNSSSGEVLLCDTRRSFVQSRGRLIAT LGVDDLLIIDTPDALLVADRKRSQDVRDIVAELKRRGHPAYLQHRTSQRPWGHYTVLEDGPRYKIKRIVVKPGATLSLQM HHHRSEHWVVVSGTALVVNGEDEKLVHCNESTFIPAGVRHRVANPGVIDLVMIEVQSGDYLGEDDIVRFSDHYGRSESAG
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=482, Percent_Identity=46.4730290456432, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 52622; Mature: 52622
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPCILSGGAGTRLWPVSRMELPKPFIRMADGHSLLQKTFQRAARLPGVRRVMAVTNQQA CCCEEEECCCCCEEEECHHHCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHH MFRTLEECSEVNERQLALELLLEPAGRNTAPAIAAAALDMLERQEGSEAILLVLPADHLV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHC TDEEAFAAAVQEAWELAEAGRIVAFGLKPSRPETGFGYIEQGEPLAGKGFEVARFVEKPD CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC AAAAQAYLDDGRYWWNSGMLCFSALVMCDALARLAPEVLDGVEACLRASPCLSGAGRRQR HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ELDKASFALCPDISIDYAVMEKTDNAAVVPCDLGWSDIGNWDSLMGEFPADGNGNSSSGE HHHHHHEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCC VLLCDTRRSFVQSRGRLIATLGVDDLLIIDTPDALLVADRKRSQDVRDIVAELKRRGHPA EEEECCHHHHHHCCCCEEEEECCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCH YLQHRTSQRPWGHYTVLEDGPRYKIKRIVVKPGATLSLQMHHHRSEHWVVVSGTALVVNG HHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECEEEEEEC EDEKLVHCNESTFIPAGVRHRVANPGVIDLVMIEVQSGDYLGEDDIVRFSDHYGRSESAG CCCEEEEECCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHCCCCCCCC >Mature Secondary Structure MIPCILSGGAGTRLWPVSRMELPKPFIRMADGHSLLQKTFQRAARLPGVRRVMAVTNQQA CCCEEEECCCCCEEEECHHHCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHH MFRTLEECSEVNERQLALELLLEPAGRNTAPAIAAAALDMLERQEGSEAILLVLPADHLV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHC TDEEAFAAAVQEAWELAEAGRIVAFGLKPSRPETGFGYIEQGEPLAGKGFEVARFVEKPD CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC AAAAQAYLDDGRYWWNSGMLCFSALVMCDALARLAPEVLDGVEACLRASPCLSGAGRRQR HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ELDKASFALCPDISIDYAVMEKTDNAAVVPCDLGWSDIGNWDSLMGEFPADGNGNSSSGE HHHHHHEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCC VLLCDTRRSFVQSRGRLIATLGVDDLLIIDTPDALLVADRKRSQDVRDIVAELKRRGHPA EEEECCHHHHHHCCCCEEEEECCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCH YLQHRTSQRPWGHYTVLEDGPRYKIKRIVVKPGATLSLQMHHHRSEHWVVVSGTALVVNG HHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECEEEEEEC EDEKLVHCNESTFIPAGVRHRVANPGVIDLVMIEVQSGDYLGEDDIVRFSDHYGRSESAG CCCEEEEECCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]