| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498604
Identifier: 34498604
GI number: 34498604
Start: 3433183
End: 3433884
Strand: Direct
Name: 34498604
Synonym: CV_3149
Alternate gene names: NA
Gene position: 3433183-3433884 (Clockwise)
Preceding gene: 34498600
Following gene: 34498606
Centisome position: 72.26
GC content: 69.8
Gene sequence:
>702_bases ATGAACGCTCGCTACACCATCAATATTCTCAACAACAGCAGGCACAGCCAGGACTTCTTCCTGTTCCAGGAGCCGGCCCG CTACGTCGGCTCGGACAGCCGCGTCTACAGCAACAGCCTCTACCACCGGGCCTTGCCGCCGATATCGGAAACCGGCGCCA TCCTGATCCTGGAGCTGCTGCCGTCCAGCTTCGCCGCCGCGCAGGCCCGCGCGGACCCGGCGCCGCGCCCCGGCCTGCCC TCTGGGCACGCCATGTCCTGCCAGCCGGTGCGGACCGCCCGCCCGGGCCACTCCGCGCCTAACGCGGTCACCATGAGCCT GGAGCCCGAACCTGAACTCAGCGCCGCCCGCCATCATCCCGGCGTGAGAGAGAACGCGTTTCGCATCAGCATTCCCGACT ACGACGCCGGGCGGCGGCCCTGCAACGTCGGCCAGGCGGTGCGCACCGGCGACGGCCGCATGGTGCTGTCCAGCTTCATC GACGCCAGTCCGGGCCGCGACATCGACTGCGCGCCGCTTCCGCGCTTCTACGCCGGCGTCGGCCGCCGCCACGCCGGCAC CGTCATCGATTTCGCCAGCTGCCGCGAAGGCGCGGCCGTCTGCGACGCCGGCGAAGGCCATACCACTTTCAACCTGATCT ACGACCGCCGCGGCGACTGGATAGTCGAGGTCGTCGAAGGCCGCCCCGCCTGGCAGACCTGA
Upstream 100 bases:
>100_bases CAATACTTTACAAACTGGCACGCTTGCTGCTGTAGACAGCGGATGCCGCAAGACCGGCCTGGCCCGGAGGCGGCGAAAAA CACACACCCGGAAATTGGGC
Downstream 100 bases:
>100_bases GCTCAGCTGCGTTCGGCCGCGGCATCCGATGCCTGCCGCTTCAGCAGCCGCTGGTAATGGTCGATAAGTTCCGGACCATG CAAGGCGTCGAGATGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNARYTINILNNSRHSQDFFLFQEPARYVGSDSRVYSNSLYHRALPPISETGAILILELLPSSFAAAQARADPAPRPGLP SGHAMSCQPVRTARPGHSAPNAVTMSLEPEPELSAARHHPGVRENAFRISIPDYDAGRRPCNVGQAVRTGDGRMVLSSFI DASPGRDIDCAPLPRFYAGVGRRHAGTVIDFASCREGAAVCDAGEGHTTFNLIYDRRGDWIVEVVEGRPAWQT
Sequences:
>Translated_233_residues MNARYTINILNNSRHSQDFFLFQEPARYVGSDSRVYSNSLYHRALPPISETGAILILELLPSSFAAAQARADPAPRPGLP SGHAMSCQPVRTARPGHSAPNAVTMSLEPEPELSAARHHPGVRENAFRISIPDYDAGRRPCNVGQAVRTGDGRMVLSSFI DASPGRDIDCAPLPRFYAGVGRRHAGTVIDFASCREGAAVCDAGEGHTTFNLIYDRRGDWIVEVVEGRPAWQT >Mature_233_residues MNARYTINILNNSRHSQDFFLFQEPARYVGSDSRVYSNSLYHRALPPISETGAILILELLPSSFAAAQARADPAPRPGLP SGHAMSCQPVRTARPGHSAPNAVTMSLEPEPELSAARHHPGVRENAFRISIPDYDAGRRPCNVGQAVRTGDGRMVLSSFI DASPGRDIDCAPLPRFYAGVGRRHAGTVIDFASCREGAAVCDAGEGHTTFNLIYDRRGDWIVEVVEGRPAWQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25367; Mature: 25367
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARYTINILNNSRHSQDFFLFQEPARYVGSDSRVYSNSLYHRALPPISETGAILILELL CCCEEEEEEECCCCCCCCEEEEECHHHHHCCCCEEHHCCHHHHCCCCCCCCCCEEEEEHH PSSFAAAQARADPAPRPGLPSGHAMSCQPVRTARPGHSAPNAVTMSLEPEPELSAARHHP CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCC GVRENAFRISIPDYDAGRRPCNVGQAVRTGDGRMVLSSFIDASPGRDIDCAPLPRFYAGV CCCCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHC GRRHAGTVIDFASCREGAAVCDAGEGHTTFNLIYDRRGDWIVEVVEGRPAWQT CCCCCCCEEEHHHCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCC >Mature Secondary Structure MNARYTINILNNSRHSQDFFLFQEPARYVGSDSRVYSNSLYHRALPPISETGAILILELL CCCEEEEEEECCCCCCCCEEEEECHHHHHCCCCEEHHCCHHHHCCCCCCCCCCEEEEEHH PSSFAAAQARADPAPRPGLPSGHAMSCQPVRTARPGHSAPNAVTMSLEPEPELSAARHHP CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCC GVRENAFRISIPDYDAGRRPCNVGQAVRTGDGRMVLSSFIDASPGRDIDCAPLPRFYAGV CCCCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHC GRRHAGTVIDFASCREGAAVCDAGEGHTTFNLIYDRRGDWIVEVVEGRPAWQT CCCCCCCEEEHHHCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA