| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498606
Identifier: 34498606
GI number: 34498606
Start: 3434843
End: 3436402
Strand: Direct
Name: 34498606
Synonym: CV_3151
Alternate gene names: NA
Gene position: 3434843-3436402 (Clockwise)
Preceding gene: 34498604
Following gene: 34498608
Centisome position: 72.3
GC content: 69.62
Gene sequence:
>1560_bases ATGACCGCCGACTCCATACGCTTTGAACTCACCCCGCCCTATCGCCATGACGGCAAACCTGCCCGTTTCCAGTCGCTGTG GCTGCTCGCGCGGCTCCATTACGCGGCGGCCCACGAAGACGGCATGGTGGCGGTTTCCGCGCTGCGCCAGCGTTTTCCCG CCAGCCGGACGCCGCGCATGCTGGTTTCCCGAGCGTTTGCCGATTTCGCCGCCTGGGGCGTGGAGGTCGGCTGGGGCGCG CCGCCCAGCGAATCCATCGCCCTGCTGAACCCGGACGGCCGCAGCCGCGGCCCCTTCTGGCTGAGCGCCGCCGGCCACGC GCGGCTGGGCTTCCTGGTGGACGGAAAACCCGCCGATCGCCGCCAGCTGGAACTATTCCTGGGACTGGCGCCCTGGCCCT CCTCGGAGCCGGACGCCGCCCGCTTGGACACGTTGTCGCACAACCTCGATTACTGGAGCCAGCTCACCCAGGCGATCCGC GACGAACGCGACGGCATGGGCAGGCTGGCGGGACCGCAGGTGGCCGCCTCCTTCCATGCCGCCAGCCTGGCGGCGCGCAA CGATTTCCAGCAGGCGCTGGCGTTGACCAAGGAGAGCCTGGCCTGGCGCCGCAGCGCCCAATTCGACGACAGCAGGCTGG CGCTGAAAAAACTGGGGCGGGTGCTGGACGGCCGCCGTTTCGAAACCGCCCAGCCCACCTTCGCCGCGATGGCTTGCATC GCGCGCGCTTGGGACCATTACGCGCGCGGAGAATCCGTGAGCGCCGAAGCTTGCCTCGGCCAACTGCTCGGCCCGGGCGA GTTGCAGCCGGTCTACCGCTACAACCCCCGCGTGCGTTTCGAATGCCTGAACCTGGGCGCGCTGCTGCACAAGCAGGCCG CCATCGCAGAGCGCGCGCCGGAACGCGCGGAAGCGGCGTTGCGCGATTTGGCCGGCGCCCTGGAAGCCGCCTACGAGGCG GACTCCATCGACGCCGCCCAGCACGTGGCGGCCAATCTGGGCTGGTGCCTGTGGCTGTTCTGGCAGCAACAGCTGATCGA TCCGCTGCGCGTGCTGCGGATGGCGGACATGCAGCGTCTGGCGATGCGCTGGCTGGGATTGTCGGAATGGATTTGCGACC GCTTCGGCGTGGGCAACGGCTCAGCCTGGAACGTCGTGTTCCTGCTGCGCATCGCCCGCGGCGATTGCCTGCATGCCAAG CGGCCGTCCCTCGCCGGATTCCGGTCCGCCAAGCCGTTCCCGCTGCAAGACCTGCGCGACGCGCTGGCCCTGTCGCCCTG CCCGTTTTCCGCGGCCAAGGGCTACCGCAGCTGGGCGGCCGTCGCGGAAGTGACGCTGGAGGAGCACGACCAGGGCCGCC TGCCGCTGACGCCGCTGCAACTGGCCAACCTGTTGCTGGAGACGCTGTGGTTCCAGGCCTGGGAAGACGGGCTCAGCAGG CGGGCCTGCGGCAACGCGCAGAGGCTGAAGCTGCTGCTGCCGCATCTGCGCCGCAGCGAGCGCAGCTTCTTCCGCGCCGA GATGGCCGCACTGCCGCCGGAGCTGTTGGAGTCCGGATAA
Upstream 100 bases:
>100_bases AATCAGGTGTGCCTGCCCAAACCGCGATCCCGGCAGGATTCTAGCCAGCCCGATCCGGCGGGGTAAACCGCGCCGGCCGT AACTGCCGTAACCGAACGAC
Downstream 100 bases:
>100_bases AAGACAAGCCCGCGCGGGTCGACGCGCGGGCTTGCCGGGGAGACAGGGCCATCGCTCACAAATCGCTGAGCCAGGCCTTT TCCTTCAACTGCTTCAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MTADSIRFELTPPYRHDGKPARFQSLWLLARLHYAAAHEDGMVAVSALRQRFPASRTPRMLVSRAFADFAAWGVEVGWGA PPSESIALLNPDGRSRGPFWLSAAGHARLGFLVDGKPADRRQLELFLGLAPWPSSEPDAARLDTLSHNLDYWSQLTQAIR DERDGMGRLAGPQVAASFHAASLAARNDFQQALALTKESLAWRRSAQFDDSRLALKKLGRVLDGRRFETAQPTFAAMACI ARAWDHYARGESVSAEACLGQLLGPGELQPVYRYNPRVRFECLNLGALLHKQAAIAERAPERAEAALRDLAGALEAAYEA DSIDAAQHVAANLGWCLWLFWQQQLIDPLRVLRMADMQRLAMRWLGLSEWICDRFGVGNGSAWNVVFLLRIARGDCLHAK RPSLAGFRSAKPFPLQDLRDALALSPCPFSAAKGYRSWAAVAEVTLEEHDQGRLPLTPLQLANLLLETLWFQAWEDGLSR RACGNAQRLKLLLPHLRRSERSFFRAEMAALPPELLESG
Sequences:
>Translated_519_residues MTADSIRFELTPPYRHDGKPARFQSLWLLARLHYAAAHEDGMVAVSALRQRFPASRTPRMLVSRAFADFAAWGVEVGWGA PPSESIALLNPDGRSRGPFWLSAAGHARLGFLVDGKPADRRQLELFLGLAPWPSSEPDAARLDTLSHNLDYWSQLTQAIR DERDGMGRLAGPQVAASFHAASLAARNDFQQALALTKESLAWRRSAQFDDSRLALKKLGRVLDGRRFETAQPTFAAMACI ARAWDHYARGESVSAEACLGQLLGPGELQPVYRYNPRVRFECLNLGALLHKQAAIAERAPERAEAALRDLAGALEAAYEA DSIDAAQHVAANLGWCLWLFWQQQLIDPLRVLRMADMQRLAMRWLGLSEWICDRFGVGNGSAWNVVFLLRIARGDCLHAK RPSLAGFRSAKPFPLQDLRDALALSPCPFSAAKGYRSWAAVAEVTLEEHDQGRLPLTPLQLANLLLETLWFQAWEDGLSR RACGNAQRLKLLLPHLRRSERSFFRAEMAALPPELLESG >Mature_518_residues TADSIRFELTPPYRHDGKPARFQSLWLLARLHYAAAHEDGMVAVSALRQRFPASRTPRMLVSRAFADFAAWGVEVGWGAP PSESIALLNPDGRSRGPFWLSAAGHARLGFLVDGKPADRRQLELFLGLAPWPSSEPDAARLDTLSHNLDYWSQLTQAIRD ERDGMGRLAGPQVAASFHAASLAARNDFQQALALTKESLAWRRSAQFDDSRLALKKLGRVLDGRRFETAQPTFAAMACIA RAWDHYARGESVSAEACLGQLLGPGELQPVYRYNPRVRFECLNLGALLHKQAAIAERAPERAEAALRDLAGALEAAYEAD SIDAAQHVAANLGWCLWLFWQQQLIDPLRVLRMADMQRLAMRWLGLSEWICDRFGVGNGSAWNVVFLLRIARGDCLHAKR PSLAGFRSAKPFPLQDLRDALALSPCPFSAAKGYRSWAAVAEVTLEEHDQGRLPLTPLQLANLLLETLWFQAWEDGLSRR ACGNAQRLKLLLPHLRRSERSFFRAEMAALPPELLESG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57726; Mature: 57594
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADSIRFELTPPYRHDGKPARFQSLWLLARLHYAAAHEDGMVAVSALRQRFPASRTPRM CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH LVSRAFADFAAWGVEVGWGAPPSESIALLNPDGRSRGPFWLSAAGHARLGFLVDGKPADR HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCH RQLELFLGLAPWPSSEPDAARLDTLSHNLDYWSQLTQAIRDERDGMGRLAGPQVAASFHA HHEEHEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ASLAARNDFQQALALTKESLAWRRSAQFDDSRLALKKLGRVLDGRRFETAQPTFAAMACI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ARAWDHYARGESVSAEACLGQLLGPGELQPVYRYNPRVRFECLNLGALLHKQAAIAERAP HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHCH ERAEAALRDLAGALEAAYEADSIDAAQHVAANLGWCLWLFWQQQLIDPLRVLRMADMQRL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRWLGLSEWICDRFGVGNGSAWNVVFLLRIARGDCLHAKRPSLAGFRSAKPFPLQDLRD HHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALALSPCPFSAAKGYRSWAAVAEVTLEEHDQGRLPLTPLQLANLLLETLWFQAWEDGLSR HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RACGNAQRLKLLLPHLRRSERSFFRAEMAALPPELLESG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure TADSIRFELTPPYRHDGKPARFQSLWLLARLHYAAAHEDGMVAVSALRQRFPASRTPRM CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH LVSRAFADFAAWGVEVGWGAPPSESIALLNPDGRSRGPFWLSAAGHARLGFLVDGKPADR HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCH RQLELFLGLAPWPSSEPDAARLDTLSHNLDYWSQLTQAIRDERDGMGRLAGPQVAASFHA HHEEHEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ASLAARNDFQQALALTKESLAWRRSAQFDDSRLALKKLGRVLDGRRFETAQPTFAAMACI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ARAWDHYARGESVSAEACLGQLLGPGELQPVYRYNPRVRFECLNLGALLHKQAAIAERAP HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHCH ERAEAALRDLAGALEAAYEADSIDAAQHVAANLGWCLWLFWQQQLIDPLRVLRMADMQRL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRWLGLSEWICDRFGVGNGSAWNVVFLLRIARGDCLHAKRPSLAGFRSAKPFPLQDLRD HHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALALSPCPFSAAKGYRSWAAVAEVTLEEHDQGRLPLTPLQLANLLLETLWFQAWEDGLSR HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RACGNAQRLKLLLPHLRRSERSFFRAEMAALPPELLESG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA