| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ilvA [H]
Identifier: 34498548
GI number: 34498548
Start: 3377774
End: 3379303
Strand: Reverse
Name: ilvA [H]
Synonym: CV_3093
Alternate gene names: 34498548
Gene position: 3379303-3377774 (Counterclockwise)
Preceding gene: 34498558
Following gene: 34498547
Centisome position: 71.13
GC content: 64.31
Gene sequence:
>1530_bases ATGAGCAACAAGCAAGACTATCTGGAACGCATCCTCACCTCGCGGGTGTACGACGTGGCGGTGGAAACGCCGCTGGAGCT GGCGCCCAATCTGTCGCGCCGTTACCGCAACCACATCCTGCTCAAGCGCGAGGATCTGCAGCCAGTGTTCTCGTTCAAGC TGCGCGGCGCTTACAACAAGATGGCCAAGCTGACGCCGGAGCAGCGCGCGCGCGGCGTGATCACCGCCAGCGCCGGCAAC CACGCCCAGGGCGTGGCGCTGTCGGCCAGCAAGCTCGGCTGCGAGGCGGTGATCGTGATGCCGGTCACCACGCCGCAGAT CAAGATAGACGCGGTGAAGCAGCGCGGCGGCCAGGTGGTGCTGTCGGGAGACTCCTTCAACGAAGCCTACCTGCATGCGG TGAAGCTGGCCGAGGAGAGCGGCCGCACCTACATCCCGCCTTTCGACGACCCGGACGTGATCGCCGGCCAGGGGACGGTG GGCATGGAAATCCTGCGCCAGCATCCGGATGATCTGGATGCCGTATTCGTCGCCATCGGCGGCGGCGGCCTGGCGGCCGG CGTGGCCAGCTTCATCAAACGGCTGAAGCCCGAGATCAAGATCATCGGCGTGCAGCCTGTCGACTCGGACGCGATGCGCC AGTCCATAGAGAAGGGCGAGCGGGTCGAGCTGAAGGATGTGGGTTTGTTCGCCGACGGCGTGGCGGTGAAGCTGGTGGGC GAAGAGACCTTCCGCATCTGCCGCGAGCTGCTGGACGAGATCATCCTGGTGGATTCCGACGCCATCTGCGCGGCGATCAA GGATATTTTTGAAGATACCCGCTCCATCGTCGAGCCGGCCGGCGCGCTGGCGGTGGCGGGCGCCAAGGCCTACATCGAGC GCGAGGGCTGCGAGGGCCAGTCGCTGGTGGCGATCTCCTGCGGCGCCAACATGAATTTCGACCGCCTGCGCCATGTCTCG GAGCGATCCGAGCTCGGCGAGCGGCGCGAGGCCATCATTGCCGTCACCATTCCGGAGAAGCCGGGCAGCTTTAAGCGCTT CTGTTCGGTGATAGGCGGCCGCAACATCACCGAGTTCAACTACCGTTTCGCCGACCCCAGCGTCGCCCATGTGTTCGTCG GCGTGCAGATCGCCGGCAAGGAGGATGTGGAAAAGCTGTTGCGCGACTTGCGCGCGGCGGAGCTGGATGGCATCGACCTG ACCGACAACGAGCTGGCCAAGCTGCACATCCGCCACTTGGTCGGCGGCCACGCGCCGCAACTGAAGGACGAACGCGTGCT GCGCTTCGAGTTTCCCGACCGTCCCGGCGCGCTGATGCGCTTTTTGGAGGCGATGCGCACCGACTGGAACATCAGCCTGT TCCACTACCGCAACCATGGCGCGGACTATGGCCGGGTGCTGGTCGGCATCCAGGTGCCGTCCGGCGACGCCCAGGCCTTT CAGCAATTCCTCGACACGCTCGGATATCCTTATATAGAGGAAACCGAAAATCCGGCCTATCGATTGTTCCTTGGCAAGAC CATCCGTTGA
Upstream 100 bases:
>100_bases GCATTGCAGCAAAATCTGTCCGGCAGGCCTCCCGCTAGTTTGGAGTTCCTGTTAGTCTGACAGTTCAAACACAAGAAACT ACAGGGACGAAAGCAGCGCC
Downstream 100 bases:
>100_bases TGGTGCAATGTCGGCCTCATTCCCAATCCGCTGAAGCAGGAATCATGATCAAGGCAGTATTGTTCGATTTGGACGGCACG TTGGCCGACACCGCCCGCGA
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSNKQDYLERILTSRVYDVAVETPLELAPNLSRRYRNHILLKREDLQPVFSFKLRGAYNKMAKLTPEQRARGVITASAGN HAQGVALSASKLGCEAVIVMPVTTPQIKIDAVKQRGGQVVLSGDSFNEAYLHAVKLAEESGRTYIPPFDDPDVIAGQGTV GMEILRQHPDDLDAVFVAIGGGGLAAGVASFIKRLKPEIKIIGVQPVDSDAMRQSIEKGERVELKDVGLFADGVAVKLVG EETFRICRELLDEIILVDSDAICAAIKDIFEDTRSIVEPAGALAVAGAKAYIEREGCEGQSLVAISCGANMNFDRLRHVS ERSELGERREAIIAVTIPEKPGSFKRFCSVIGGRNITEFNYRFADPSVAHVFVGVQIAGKEDVEKLLRDLRAAELDGIDL TDNELAKLHIRHLVGGHAPQLKDERVLRFEFPDRPGALMRFLEAMRTDWNISLFHYRNHGADYGRVLVGIQVPSGDAQAF QQFLDTLGYPYIEETENPAYRLFLGKTIR
Sequences:
>Translated_509_residues MSNKQDYLERILTSRVYDVAVETPLELAPNLSRRYRNHILLKREDLQPVFSFKLRGAYNKMAKLTPEQRARGVITASAGN HAQGVALSASKLGCEAVIVMPVTTPQIKIDAVKQRGGQVVLSGDSFNEAYLHAVKLAEESGRTYIPPFDDPDVIAGQGTV GMEILRQHPDDLDAVFVAIGGGGLAAGVASFIKRLKPEIKIIGVQPVDSDAMRQSIEKGERVELKDVGLFADGVAVKLVG EETFRICRELLDEIILVDSDAICAAIKDIFEDTRSIVEPAGALAVAGAKAYIEREGCEGQSLVAISCGANMNFDRLRHVS ERSELGERREAIIAVTIPEKPGSFKRFCSVIGGRNITEFNYRFADPSVAHVFVGVQIAGKEDVEKLLRDLRAAELDGIDL TDNELAKLHIRHLVGGHAPQLKDERVLRFEFPDRPGALMRFLEAMRTDWNISLFHYRNHGADYGRVLVGIQVPSGDAQAF QQFLDTLGYPYIEETENPAYRLFLGKTIR >Mature_508_residues SNKQDYLERILTSRVYDVAVETPLELAPNLSRRYRNHILLKREDLQPVFSFKLRGAYNKMAKLTPEQRARGVITASAGNH AQGVALSASKLGCEAVIVMPVTTPQIKIDAVKQRGGQVVLSGDSFNEAYLHAVKLAEESGRTYIPPFDDPDVIAGQGTVG MEILRQHPDDLDAVFVAIGGGGLAAGVASFIKRLKPEIKIIGVQPVDSDAMRQSIEKGERVELKDVGLFADGVAVKLVGE ETFRICRELLDEIILVDSDAICAAIKDIFEDTRSIVEPAGALAVAGAKAYIEREGCEGQSLVAISCGANMNFDRLRHVSE RSELGERREAIIAVTIPEKPGSFKRFCSVIGGRNITEFNYRFADPSVAHVFVGVQIAGKEDVEKLLRDLRAAELDGIDLT DNELAKLHIRHLVGGHAPQLKDERVLRFEFPDRPGALMRFLEAMRTDWNISLFHYRNHGADYGRVLVGIQVPSGDAQAFQ QFLDTLGYPYIEETENPAYRLFLGKTIR
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=296, Percent_Identity=32.7702702702703, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI33469958, Length=320, Percent_Identity=30.625, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI19923959, Length=323, Percent_Identity=28.7925696594427, Blast_Score=94, Evalue=4e-19, Organism=Escherichia coli, GI1790207, Length=501, Percent_Identity=55.688622754491, Blast_Score=529, Evalue=1e-151, Organism=Escherichia coli, GI1789505, Length=309, Percent_Identity=39.4822006472492, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71991565, Length=377, Percent_Identity=33.42175066313, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17508781, Length=287, Percent_Identity=32.404181184669, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17537387, Length=344, Percent_Identity=32.5581395348837, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17535051, Length=272, Percent_Identity=26.1029411764706, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320930, Length=517, Percent_Identity=51.6441005802708, Blast_Score=514, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=36.963696369637, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319788, Length=301, Percent_Identity=25.9136212624585, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI21355833, Length=414, Percent_Identity=30.6763285024155, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24645328, Length=342, Percent_Identity=28.3625730994152, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56154; Mature: 56023
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKQDYLERILTSRVYDVAVETPLELAPNLSRRYRNHILLKREDLQPVFSFKLRGAYNK CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCEEEEECCCCHHHHHHHCCHHHH MAKLTPEQRARGVITASAGNHAQGVALSASKLGCEAVIVMPVTTPQIKIDAVKQRGGQVV HHHCCHHHHHCEEEEECCCCCCCCEEEEHHHCCCEEEEEEECCCCCEEEEEHHCCCCEEE LSGDSFNEAYLHAVKLAEESGRTYIPPFDDPDVIAGQGTVGMEILRQHPDDLDAVFVAIG EECCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCHHHHHHHCCCCCCCEEEEEEC GGGLAAGVASFIKRLKPEIKIIGVQPVDSDAMRQSIEKGERVELKDVGLFADGVAVKLVG CCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCEEECCEEEEEEC EETFRICRELLDEIILVDSDAICAAIKDIFEDTRSIVEPAGALAVAGAKAYIEREGCEGQ HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCC SLVAISCGANMNFDRLRHVSERSELGERREAIIAVTIPEKPGSFKRFCSVIGGRNITEFN EEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEE YRFADPSVAHVFVGVQIAGKEDVEKLLRDLRAAELDGIDLTDNELAKLHIRHLVGGHAPQ EEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC LKDERVLRFEFPDRPGALMRFLEAMRTDWNISLFHYRNHGADYGRVLVGIQVPSGDAQAF CCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHH QQFLDTLGYPYIEETENPAYRLFLGKTIR HHHHHHHCCCCEECCCCCEEEEEECCCCC >Mature Secondary Structure SNKQDYLERILTSRVYDVAVETPLELAPNLSRRYRNHILLKREDLQPVFSFKLRGAYNK CCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCEEEEECCCCHHHHHHHCCHHHH MAKLTPEQRARGVITASAGNHAQGVALSASKLGCEAVIVMPVTTPQIKIDAVKQRGGQVV HHHCCHHHHHCEEEEECCCCCCCCEEEEHHHCCCEEEEEEECCCCCEEEEEHHCCCCEEE LSGDSFNEAYLHAVKLAEESGRTYIPPFDDPDVIAGQGTVGMEILRQHPDDLDAVFVAIG EECCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCHHHHHHHCCCCCCCEEEEEEC GGGLAAGVASFIKRLKPEIKIIGVQPVDSDAMRQSIEKGERVELKDVGLFADGVAVKLVG CCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCEEECCEEEEEEC EETFRICRELLDEIILVDSDAICAAIKDIFEDTRSIVEPAGALAVAGAKAYIEREGCEGQ HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCC SLVAISCGANMNFDRLRHVSERSELGERREAIIAVTIPEKPGSFKRFCSVIGGRNITEFN EEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEE YRFADPSVAHVFVGVQIAGKEDVEKLLRDLRAAELDGIDLTDNELAKLHIRHLVGGHAPQ EEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC LKDERVLRFEFPDRPGALMRFLEAMRTDWNISLFHYRNHGADYGRVLVGIQVPSGDAQAF CCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHH QQFLDTLGYPYIEETENPAYRLFLGKTIR HHHHHHHCCCCEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA