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The map label for this gene is fliY [C]

Identifier: 34498438

GI number: 34498438

Start: 3261178

End: 3261942

Strand: Reverse

Name: fliY [C]

Synonym: CV_2983

Alternate gene names: 34498438

Gene position: 3261942-3261178 (Counterclockwise)

Preceding gene: 34498439

Following gene: 34498437

Centisome position: 68.66

GC content: 63.01

Gene sequence:

>765_bases
ATGAAAAAACTGAACGCAGCGCTTGCACTGATTCTGGCCGCGGCGGGCGCCGTCGCCCACGCCGACGACCTGGCCGATAT
CCGCAAGGCCGGCGTGCTGAAGATAGGCACCGAAGGCACTTACGCGCCCTTCACCTATCATGACGCCGCGGGCAGCCTGA
CCGGCTTCGACGTGGAGATCGCCCAGGCCATCGCCGCTAGGCTGGGCGTCAAGCCGCAATTCGTCGAAGGCAAGTGGGAC
GGCCTGATCGCCGGGCTCGACGTCAAGCGCTACGACGTGGTGATCAACGAGGTGGCGATCACCGACGCGCGCAAGGTGAA
ATACGACTTCTCCGCGCCCTACATTGTCTCCAAGGCTGTGCTGATCGTCCGCGACGACAATCGCGACATCAAGCGTTTTG
AAGATCTGAAGGGCCGCAAGTCGGCCAACACCCTGACCAGCAACTTCGGCAAGCTGGCGCAGCGCTACGGCGCGGAAATC
GTGCCGACCCAGGGCTTCAACGAATCGGTCGCTTTGCTTGAGTCCGGCCGGGTGGAAACCACCATCAACGACAGCCTGTC
CTTCCTCGACTTCAAGAAGAAGCAACCCAAGTCTCGGCTGAAGGTGGCCGCCACCGAGGCGAACGGCGACGCGTCCGGCG
TGCTGCTGCGCAAGGGCAATCCGGAGCTGAAGGCGGCCATCGACAAGGCGCTGGCGGGAATCAAGGCCGACGGCACCTAC
CAGAAGATCTCGCACAAGTATTTCGGCGCCGACGTGTCGCGCTGA

Upstream 100 bases:

>100_bases
AGTAAAATAATATTACTTAATGTTCTGATTTTCGGCTGATATGGTGTCGCCATGCCCGGCCGGGTCTAGGCTGGATAAAC
CGCATTCTGGAGAATGGACA

Downstream 100 bases:

>100_bases
GTTGAGGAGCGGCAATGCCTCCGTGGTTGCAGTTGATGGCAGATTCGCTGCCATCTCTTTTATATGCCGGCCTGGTGTTC
ACCGTGCCGTTGACGCTGCT

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKKLNAALALILAAAGAVAHADDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEIAQAIAARLGVKPQFVEGKWD
GLIAGLDVKRYDVVINEVAITDARKVKYDFSAPYIVSKAVLIVRDDNRDIKRFEDLKGRKSANTLTSNFGKLAQRYGAEI
VPTQGFNESVALLESGRVETTINDSLSFLDFKKKQPKSRLKVAATEANGDASGVLLRKGNPELKAAIDKALAGIKADGTY
QKISHKYFGADVSR

Sequences:

>Translated_254_residues
MKKLNAALALILAAAGAVAHADDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEIAQAIAARLGVKPQFVEGKWD
GLIAGLDVKRYDVVINEVAITDARKVKYDFSAPYIVSKAVLIVRDDNRDIKRFEDLKGRKSANTLTSNFGKLAQRYGAEI
VPTQGFNESVALLESGRVETTINDSLSFLDFKKKQPKSRLKVAATEANGDASGVLLRKGNPELKAAIDKALAGIKADGTY
QKISHKYFGADVSR
>Mature_254_residues
MKKLNAALALILAAAGAVAHADDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEIAQAIAARLGVKPQFVEGKWD
GLIAGLDVKRYDVVINEVAITDARKVKYDFSAPYIVSKAVLIVRDDNRDIKRFEDLKGRKSANTLTSNFGKLAQRYGAEI
VPTQGFNESVALLESGRVETTINDSLSFLDFKKKQPKSRLKVAATEANGDASGVLLRKGNPELKAAIDKALAGIKADGTY
QKISHKYFGADVSR

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=258, Percent_Identity=40.3100775193798, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=32.9004329004329, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1787085, Length=253, Percent_Identity=31.2252964426877, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788649, Length=262, Percent_Identity=29.7709923664122, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787088, Length=224, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787031, Length=251, Percent_Identity=26.2948207171315, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 27329; Mature: 27329

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNAALALILAAAGAVAHADDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEI
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCCCCCCCHHHH
AQAIAARLGVKPQFVEGKWDGLIAGLDVKRYDVVINEVAITDARKVKYDFSAPYIVSKAV
HHHHHHHHCCCCEEECCCCCCEEECCCCCHHHEEEEHEEECCCCEEEECCCCCCEEEEEE
LIVRDDNRDIKRFEDLKGRKSANTLTSNFGKLAQRYGAEIVPTQGFNESVALLESGRVET
EEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHCCCEEE
TINDSLSFLDFKKKQPKSRLKVAATEANGDASGVLLRKGNPELKAAIDKALAGIKADGTY
ECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCH
QKISHKYFGADVSR
HHHHHHHCCCCCCC
>Mature Secondary Structure
MKKLNAALALILAAAGAVAHADDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEI
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCCCCCCCHHHH
AQAIAARLGVKPQFVEGKWDGLIAGLDVKRYDVVINEVAITDARKVKYDFSAPYIVSKAV
HHHHHHHHCCCCEEECCCCCCEEECCCCCHHHEEEEHEEECCCCEEEECCCCCCEEEEEE
LIVRDDNRDIKRFEDLKGRKSANTLTSNFGKLAQRYGAEIVPTQGFNESVALLESGRVET
EEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHCCCEEE
TINDSLSFLDFKKKQPKSRLKVAATEANGDASGVLLRKGNPELKAAIDKALAGIKADGTY
ECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCH
QKISHKYFGADVSR
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]