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The map label for this gene is yecS [C]

Identifier: 34498437

GI number: 34498437

Start: 3260483

End: 3261163

Strand: Reverse

Name: yecS [C]

Synonym: CV_2982

Alternate gene names: 34498437

Gene position: 3261163-3260483 (Counterclockwise)

Preceding gene: 34498438

Following gene: 34498436

Centisome position: 68.64

GC content: 66.37

Gene sequence:

>681_bases
ATGCCTCCGTGGTTGCAGTTGATGGCAGATTCGCTGCCATCTCTTTTATATGCCGGCCTGGTGTTCACCGTGCCGTTGAC
GCTGCTGTCCTTCGCCGGCGGCCTGGCGCTGGGTTTGCTGGTGGCCTTGATCCGGCTGTTCGGGCCGCGCCCGCTGGTGC
TGCTGGTGCGCGGCTACTCCTGGCTGGTGCGCGGCACGCCGCTGTTGGTGCAGCTGTTCGTGATCTTCTACGGCTTGCCG
CGGGTCGGCATCGTGTTCGATCCGTTCCCGGCGGCGCTGCTCGGCTTCGTGCTCAGCGTCGGCGCCTACACCTCGGAAGT
GATACGGGCGGCGATCTCGTCGGTGCCCAGGGCGCAGTGGGAGGCGGCGTATTCGCTGGGCATGAGCTGGTCGCAGGCGA
TGCGCCGCACCATCCTGCCGCAGGCGGGCAGGGTGGCGGTGCCGCCGCTGGCCAACTCCTTCATCTCGCTGGTGAAGGAC
ACCTCGCTGGCGGCGGTGCTGACGGTGCCGGAAATGTTCCAGGCGGCGCAGCGCATCGCGGCCACCACGTACGAGCCGCT
GCTGCTGTATCTGGAGACCGCGCTGATCTATCTGTTGTTGAGCACTGTATTGACCTGGCTGCAGGAGCGGCTGGAAAAAC
GTTTTGACCGGCATGTGGCGCCGGTGGGGGCTGCGTCGTGA

Upstream 100 bases:

>100_bases
TCGACAAGGCGCTGGCGGGAATCAAGGCCGACGGCACCTACCAGAAGATCTCGCACAAGTATTTCGGCGCCGACGTGTCG
CGCTGAGTTGAGGAGCGGCA

Downstream 100 bases:

>100_bases
TCAAGCTGAGCCATATCGTCAAATCCTTCGGCGGGCAGGAAGTGCTGCATGACGTCAGCCTGGCGCTGGCCGAGGGCGGC
GTCACCGCGCTGATTGGTCC

Product: amino-acid transport system permease ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPPWLQLMADSLPSLLYAGLVFTVPLTLLSFAGGLALGLLVALIRLFGPRPLVLLVRGYSWLVRGTPLLVQLFVIFYGLP
RVGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSVPRAQWEAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKD
TSLAAVLTVPEMFQAAQRIAATTYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDRHVAPVGAAS

Sequences:

>Translated_226_residues
MPPWLQLMADSLPSLLYAGLVFTVPLTLLSFAGGLALGLLVALIRLFGPRPLVLLVRGYSWLVRGTPLLVQLFVIFYGLP
RVGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSVPRAQWEAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKD
TSLAAVLTVPEMFQAAQRIAATTYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDRHVAPVGAAS
>Mature_225_residues
PPWLQLMADSLPSLLYAGLVFTVPLTLLSFAGGLALGLLVALIRLFGPRPLVLLVRGYSWLVRGTPLLVQLFVIFYGLPR
VGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSVPRAQWEAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDT
SLAAVLTVPEMFQAAQRIAATTYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDRHVAPVGAAS

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=51.3761467889908, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=35.7843137254902, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1788645, Length=215, Percent_Identity=34.8837209302326, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788646, Length=223, Percent_Identity=30.4932735426009, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787086, Length=224, Percent_Identity=31.6964285714286, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI87082239, Length=218, Percent_Identity=33.0275229357798, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787087, Length=238, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=33.0188679245283, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=27.3584905660377, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI48994930, Length=136, Percent_Identity=36.0294117647059, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24654; Mature: 24522

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPWLQLMADSLPSLLYAGLVFTVPLTLLSFAGGLALGLLVALIRLFGPRPLVLLVRGYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHCHH
WLVRGTPLLVQLFVIFYGLPRVGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSVPRAQW
HHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDTSLAAVLTVPEMFQAAQRIA
HHHHHHCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDRHVAPVGAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PPWLQLMADSLPSLLYAGLVFTVPLTLLSFAGGLALGLLVALIRLFGPRPLVLLVRGYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHCHH
WLVRGTPLLVQLFVIFYGLPRVGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSVPRAQW
HHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDTSLAAVLTVPEMFQAAQRIA
HHHHHHCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDRHVAPVGAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]