| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498430
Identifier: 34498430
GI number: 34498430
Start: 3252854
End: 3253387
Strand: Reverse
Name: 34498430
Synonym: CV_2975
Alternate gene names: NA
Gene position: 3253387-3252854 (Counterclockwise)
Preceding gene: 34498431
Following gene: 34498429
Centisome position: 68.48
GC content: 66.29
Gene sequence:
>534_bases ATGAAGAGACTGCTGCTGTTGGCCTGCGCGCTGCTGCTGGGCGGCTGCAACTACGTGAACAGCGTGACCGGCCTGAGCAA GGATTCGGACAAGGCGATAGGCGCCGCCTGCCGCCAGACCGGCCGCTCGCTGGAAGAGTGTTACCAGCGCAATCCGAATG CCGACAAGGCCTTCATCTACGCCGGCTGGCGCGAGATGAACGAATACATGGCCAAAAACAAGCTGGAAACGATGGAGCCG TTGCCGGAAGTCGCGGCGCAGCCGGCCTCCGGCACGACGCCGGCGGTGGCCGGCAAGCATCCCGCCAGCGGCTCCACTTC GTCGGCCGGACAGACCGGCCTGCCGGACCTGATGAGCAGCGAGGAGGCCGACCGCGCCGCCAAGAGCGATCCGCAGGTAG CGGCCGTGATGCGCGCGATTCGCAGCGGCCATTCCGCCAAGAGCGCGTCGTCGGCGCCGGCCGAGGACCAGAAGCGACTG CTCAACATCATCAAGGAACTGAACAAGTCCGATCCGGGGCGCAATCCGGGCTGA
Upstream 100 bases:
>100_bases CGCATTTCCTGTACTGGCTGGGCGCGGACAGCCGCGGCCGCAGCGGGGAAGTGGTGGAGCTGGACTTGCGCAAACCGCGC GGCTGAAACGGGGAGAGGGC
Downstream 100 bases:
>100_bases AAGCCCGTCGAGCGCCTTCCCGGTAGAGGCCGCTGTCCTCCGCGGCCGGGCGCGGAGCCGGCGCCAAGGCGTTTTTTGAC TGCCGGTTTCGCGCCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKRLLLLACALLLGGCNYVNSVTGLSKDSDKAIGAACRQTGRSLEECYQRNPNADKAFIYAGWREMNEYMAKNKLETMEP LPEVAAQPASGTTPAVAGKHPASGSTSSAGQTGLPDLMSSEEADRAAKSDPQVAAVMRAIRSGHSAKSASSAPAEDQKRL LNIIKELNKSDPGRNPG
Sequences:
>Translated_177_residues MKRLLLLACALLLGGCNYVNSVTGLSKDSDKAIGAACRQTGRSLEECYQRNPNADKAFIYAGWREMNEYMAKNKLETMEP LPEVAAQPASGTTPAVAGKHPASGSTSSAGQTGLPDLMSSEEADRAAKSDPQVAAVMRAIRSGHSAKSASSAPAEDQKRL LNIIKELNKSDPGRNPG >Mature_177_residues MKRLLLLACALLLGGCNYVNSVTGLSKDSDKAIGAACRQTGRSLEECYQRNPNADKAFIYAGWREMNEYMAKNKLETMEP LPEVAAQPASGTTPAVAGKHPASGSTSSAGQTGLPDLMSSEEADRAAKSDPQVAAVMRAIRSGHSAKSASSAPAEDQKRL LNIIKELNKSDPGRNPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18676; Mature: 18676
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLLACALLLGGCNYVNSVTGLSKDSDKAIGAACRQTGRSLEECYQRNPNADKAFIY CHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGWREMNEYMAKNKLETMEPLPEVAAQPASGTTPAVAGKHPASGSTSSAGQTGLPDLMSS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC EEADRAAKSDPQVAAVMRAIRSGHSAKSASSAPAEDQKRLLNIIKELNKSDPGRNPG HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRLLLLACALLLGGCNYVNSVTGLSKDSDKAIGAACRQTGRSLEECYQRNPNADKAFIY CHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGWREMNEYMAKNKLETMEPLPEVAAQPASGTTPAVAGKHPASGSTSSAGQTGLPDLMSS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC EEADRAAKSDPQVAAVMRAIRSGHSAKSASSAPAEDQKRLLNIIKELNKSDPGRNPG HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA