| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cdsA [H]
Identifier: 34497656
GI number: 34497656
Start: 2371319
End: 2372125
Strand: Direct
Name: cdsA [H]
Synonym: CV_2201
Alternate gene names: 34497656
Gene position: 2371319-2372125 (Clockwise)
Preceding gene: 34497655
Following gene: 34497657
Centisome position: 49.91
GC content: 68.03
Gene sequence:
>807_bases ATGCTGATAACGCGAATTCTGACCGCGCTCGTATTGCTGCCGCTGATGCTGGCGGCGCTTTTCCTGTTTCCCGCCGCGGC CTGGGCGGGGTTTTCCTGGTTGATCGTCGTGCTGGCCCTGTGGGAGTACACTCGCATGGTCGGGATGTCGCTGCCGCGTC AGGCATGCTACCTTGCGCTGTCCTCGCTGTTCGCCGCCGCGGCCTGGTTCGGCCACTGGCGGATGCAGGGCGCCGAGCAT GGCGCCGTGCTGGCGCTGTGGCTGCTGCTGGTGCCGGCCTGGCTGGCCAAGCGCTGGAAAATGCCGTCCGGCCTGACTGC CTGGCTGCTGGGCTGGGCGCTGATGCTGCCGGCTTGGTTCGCCTTTCTTGAGTGGCGCCCGAACGCCTCCGCGCGCGACG CGCTGGCGCTGTTGGCCGTGATGGGCCTGGTGTGGGTGGCCGACGTGGCGGCCTATTTCTCCGGCAAGGCCTTCGGGCGG CGCAAGCTGGCGCCGGCCATCAGTCCCGGCAAGAGCTGGGAGGGCGTGTACGGCGCCGTCGTCTGCGTGGCGGTCTATGT CGCGCTGGTCGATCATTTCGGCTGGCTGGACATCAAGCTGCCGTTGTGGGGCCTGTTGCTGCTGGCGCTGCCGTTGACCG CGGTCAGCGTGTGCGGCGACCTGCTGGAGTCCTGGTTCAAGCGCTCCGCCGGCATCAAGGACAGCAGCCGTCTGCTGCCG GGCCATGGCGGCGTGTATGACCGAATCGACAGCCTGATCGCCGTATTGGCGGTCAGCAACGCCCTGCGCGCGCTGGGCGG CATGTAA
Upstream 100 bases:
>100_bases CTGCAGGAGGCGATCCACTCCTACTGGCAGCGTGAGCGCCGCTTTGGCCGCACCAGCGAGCAATTGCCCGAACACCTGCG TCGAGACAAGCTCTGATCTC
Downstream 100 bases:
>100_bases TTCTGGAAACATAGCAATGACCAAACCTCAGGGTATTGCCGTACTGGGGGCTACTGGCAGCGTGGGCTGCAACACGCTGG ATGTGGTCGCCCGCCATCCG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLITRILTALVLLPLMLAALFLFPAAAWAGFSWLIVVLALWEYTRMVGMSLPRQACYLALSSLFAAAAWFGHWRMQGAEH GAVLALWLLLVPAWLAKRWKMPSGLTAWLLGWALMLPAWFAFLEWRPNASARDALALLAVMGLVWVADVAAYFSGKAFGR RKLAPAISPGKSWEGVYGAVVCVAVYVALVDHFGWLDIKLPLWGLLLLALPLTAVSVCGDLLESWFKRSAGIKDSSRLLP GHGGVYDRIDSLIAVLAVSNALRALGGM
Sequences:
>Translated_268_residues MLITRILTALVLLPLMLAALFLFPAAAWAGFSWLIVVLALWEYTRMVGMSLPRQACYLALSSLFAAAAWFGHWRMQGAEH GAVLALWLLLVPAWLAKRWKMPSGLTAWLLGWALMLPAWFAFLEWRPNASARDALALLAVMGLVWVADVAAYFSGKAFGR RKLAPAISPGKSWEGVYGAVVCVAVYVALVDHFGWLDIKLPLWGLLLLALPLTAVSVCGDLLESWFKRSAGIKDSSRLLP GHGGVYDRIDSLIAVLAVSNALRALGGM >Mature_268_residues MLITRILTALVLLPLMLAALFLFPAAAWAGFSWLIVVLALWEYTRMVGMSLPRQACYLALSSLFAAAAWFGHWRMQGAEH GAVLALWLLLVPAWLAKRWKMPSGLTAWLLGWALMLPAWFAFLEWRPNASARDALALLAVMGLVWVADVAAYFSGKAFGR RKLAPAISPGKSWEGVYGAVVCVAVYVALVDHFGWLDIKLPLWGLLLLALPLTAVSVCGDLLESWFKRSAGIKDSSRLLP GHGGVYDRIDSLIAVLAVSNALRALGGM
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=289, Percent_Identity=34.6020761245675, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1787677, Length=106, Percent_Identity=45.2830188679245, Blast_Score=91, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29231; Mature: 29231
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITRILTALVLLPLMLAALFLFPAAAWAGFSWLIVVLALWEYTRMVGMSLPRQACYLAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SSLFAAAAWFGHWRMQGAEHGAVLALWLLLVPAWLAKRWKMPSGLTAWLLGWALMLPAWF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AFLEWRPNASARDALALLAVMGLVWVADVAAYFSGKAFGRRKLAPAISPGKSWEGVYGAV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHCCCCCCCCCCCCHHHHHH VCVAVYVALVDHFGWLDIKLPLWGLLLLALPLTAVSVCGDLLESWFKRSAGIKDSSRLLP HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHGGVYDRIDSLIAVLAVSNALRALGGM CCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLITRILTALVLLPLMLAALFLFPAAAWAGFSWLIVVLALWEYTRMVGMSLPRQACYLAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SSLFAAAAWFGHWRMQGAEHGAVLALWLLLVPAWLAKRWKMPSGLTAWLLGWALMLPAWF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AFLEWRPNASARDALALLAVMGLVWVADVAAYFSGKAFGRRKLAPAISPGKSWEGVYGAV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHCCCCCCCCCCCCHHHHHH VCVAVYVALVDHFGWLDIKLPLWGLLLLALPLTAVSVCGDLLESWFKRSAGIKDSSRLLP HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHGGVYDRIDSLIAVLAVSNALRALGGM CCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8654980; 10984043 [H]