| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497621
Identifier: 34497621
GI number: 34497621
Start: 2339319
End: 2339528
Strand: Direct
Name: 34497621
Synonym: CV_2166
Alternate gene names: NA
Gene position: 2339319-2339528 (Clockwise)
Preceding gene: 34497620
Following gene: 34497625
Centisome position: 49.24
GC content: 64.76
Gene sequence:
>210_bases TTGTTTTTATTTGCCGGCGTGTGCTGGCTGCCGGTTGTATGGCTGCAGATCCGGATGGCGGGCATGGCCCGCGACGCGGC GGAGGCCGGGCAGGCGCTGCCGGCGCGCTACTGGCGTTTCGCGCGGATTTGGGAGTGCCTGGGCTATCCGGCCTTCTGCG CGATGCTGGCGGTGTATTTTCTGATGGTGTTGAAGCCGGACTGGTCGTGA
Upstream 100 bases:
>100_bases CCGCCGTCCATCCTCTTCCCGTATCATCCCAGCTGTTCCCGATTATCACGTTACTACTTGGTGGGTTTATCTCTCACCCC CTCATGTTTGGGCGCTGGGC
Downstream 100 bases:
>100_bases GCGTGCGGCAAGAGACCGGGAGCGAGGCTTTTCTGCGCTGCTGGAAGAGGGCGGCCACGGTCTCTTGATGGCTAGTGGAG AAGCTTCATCAGCAGTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein; Integral Membrane Protein-Like
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MFLFAGVCWLPVVWLQIRMAGMARDAAEAGQALPARYWRFARIWECLGYPAFCAMLAVYFLMVLKPDWS
Sequences:
>Translated_69_residues MFLFAGVCWLPVVWLQIRMAGMARDAAEAGQALPARYWRFARIWECLGYPAFCAMLAVYFLMVLKPDWS >Mature_69_residues MFLFAGVCWLPVVWLQIRMAGMARDAAEAGQALPARYWRFARIWECLGYPAFCAMLAVYFLMVLKPDWS
Specific function: Unknown
COG id: COG5528
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7978; Mature: 7978
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 11.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFAGVCWLPVVWLQIRMAGMARDAAEAGQALPARYWRFARIWECLGYPAFCAMLAVYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LMVLKPDWS HHHHCCCCC >Mature Secondary Structure MFLFAGVCWLPVVWLQIRMAGMARDAAEAGQALPARYWRFARIWECLGYPAFCAMLAVYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LMVLKPDWS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA