| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is rseA [C]
Identifier: 34497514
GI number: 34497514
Start: 2247096
End: 2247578
Strand: Direct
Name: rseA [C]
Synonym: CV_2059
Alternate gene names: 34497514
Gene position: 2247096-2247578 (Clockwise)
Preceding gene: 34497513
Following gene: 34497515
Centisome position: 47.3
GC content: 67.7
Gene sequence:
>483_bases ATGAAAGAAACGATATCCGCACTGATGGACGGCGAACTGGACGGGCCCGATGCCGACAAGGCAATCGCCGCCATCGCCGG AGACAAGGACCTGGATGATGCCTGGGAACAGTATCATCTGATCGGCGACGCCATGCGCGCCAACCGCCTGTCCTCGCTCA ATGTGAGGGCCAAGGTGGCGGCGCGGCTGGCGGAGGAGCCGACGGTCCTGGCGCCGCGTCGCTGGACGCGTCCGCGCAAG GCGCGCGCCGCGAGCGCGGTGGCGCTGGCCGCGAGCGTCAGCTTCGCAGCCGTAGTGGGTTGGCAGCAGCTGTCCCACCG CAACGCTCCGCCGTCGGCGATCGCCGATCGCGGCGTGCCGGTGCAGATCGCGAACCCCGCGGCGGTGATGGACCAGGATG ATCCCTATGTGCTGGCGCACCAGGAGGTGACCGCAGACCAGAGCGTGATGCGAGTGTCCTATGGAAACGGAGCTCGCCAC TGA
Upstream 100 bases:
>100_bases CGATAGGTACCGTGCGTTCGCGGATTTTCCGCGCACGCGAGGCGATTGCTGCTGAGCTCAGGCCTTTGCTGGATACGGCC AAGAACAGAAGGTGGTAAGT
Downstream 100 bases:
>100_bases TGCGTGTCGTTCCTCTGATTGGTGTTTTGATGTTCGGGGCCGCGTGCGCGGCCCATGCGGAGGATGACATGCAGCTGCTG CGCAATGTCGGCAACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVAARLAEEPTVLAPRRWTRPRK ARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVPVQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH
Sequences:
>Translated_160_residues MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVAARLAEEPTVLAPRRWTRPRK ARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVPVQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH >Mature_160_residues MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVAARLAEEPTVLAPRRWTRPRK ARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVPVQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH
Specific function: Negative Regulator Of Rpoe. [C]
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17134; Mature: 17134
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVA CHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ARLAEEPTVLAPRRWTRPRKARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVP HHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC VQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH EEECCCCEECCCCCCEEEECCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVA CHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ARLAEEPTVLAPRRWTRPRKARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVP HHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC VQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH EEECCCCEECCCCCCEEEECCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA