| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497396
Identifier: 34497396
GI number: 34497396
Start: 2112212
End: 2112637
Strand: Direct
Name: 34497396
Synonym: CV_1941
Alternate gene names: NA
Gene position: 2112212-2112637 (Clockwise)
Preceding gene: 34497392
Following gene: 34497399
Centisome position: 44.46
GC content: 64.32
Gene sequence:
>426_bases TTGACGACGCCGTTGCCGGTGCTGGACACGCGTACCATCAGCATGCGCTGGGGTGATATGGACGCGGTGGGCCATCTCAA CAACACCTATTATTTCCGCTATCTCGAGCAGGTCCGCATCGAGTGGCTGCAGGGCATGGGATTCGGCATCGAGCCGGACG GCATAGGCCCGGTGCTGGCCAGCACCAGCTGCACTTACCGCAAGCAGCTGACCTATCCGGCCACGCTGGACATCACCATC GAGCTGGAAAAGCTGGGGCGCAGCAGCCTGAAGCTGCGCCACCACTTTTACCGCAGGGACGATCCCGGCGTGGTCTACGC CAGCGCCGAGGTGCTGCTGGTCTGGGTGGATTACAAGGCCGAGAAGTCGGTGCCGATCCCGGACGCGATCCGAGCGGCGA TAACGCGCGCGCCGACCGCGGCCTGA
Upstream 100 bases:
>100_bases ACGACTGGGATTTAACACTTTCGCAAAAGAATCGGCAAATAAGCCGGGCATTCGGTTTTTGCCGTTATCATGGAGTCTTT CAGACAGTCGGGAGCAAGCC
Downstream 100 bases:
>100_bases GATGGGTCACAGCGCGTCCGGGTCCAGCTTGCGGCGGATCAGGTCGCGCAGCAGGAAACGGGACGGATGCACCGCCCGCA TCAGATCGGCGGGCAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Acyl-CoA Thioesterase; Thioesterase Family Protein Domain Protein; Thiesterase
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTTPLPVLDTRTISMRWGDMDAVGHLNNTYYFRYLEQVRIEWLQGMGFGIEPDGIGPVLASTSCTYRKQLTYPATLDITI ELEKLGRSSLKLRHHFYRRDDPGVVYASAEVLLVWVDYKAEKSVPIPDAIRAAITRAPTAA
Sequences:
>Translated_141_residues MTTPLPVLDTRTISMRWGDMDAVGHLNNTYYFRYLEQVRIEWLQGMGFGIEPDGIGPVLASTSCTYRKQLTYPATLDITI ELEKLGRSSLKLRHHFYRRDDPGVVYASAEVLLVWVDYKAEKSVPIPDAIRAAITRAPTAA >Mature_140_residues TTPLPVLDTRTISMRWGDMDAVGHLNNTYYFRYLEQVRIEWLQGMGFGIEPDGIGPVLASTSCTYRKQLTYPATLDITIE LEKLGRSSLKLRHHFYRRDDPGVVYASAEVLLVWVDYKAEKSVPIPDAIRAAITRAPTAA
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15932; Mature: 15800
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLPVLDTRTISMRWGDMDAVGHLNNTYYFRYLEQVRIEWLQGMGFGIEPDGIGPVLA CCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC STSCTYRKQLTYPATLDITIELEKLGRSSLKLRHHFYRRDDPGVVYASAEVLLVWVDYKA CCCCCCCEEECCCEEEEEEEEHHHCCCHHHHHHHHHHCCCCCCEEEECCEEEEEEEECCC EKSVPIPDAIRAAITRAPTAA CCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure TTPLPVLDTRTISMRWGDMDAVGHLNNTYYFRYLEQVRIEWLQGMGFGIEPDGIGPVLA CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC STSCTYRKQLTYPATLDITIELEKLGRSSLKLRHHFYRRDDPGVVYASAEVLLVWVDYKA CCCCCCCEEECCCEEEEEEEEHHHCCCHHHHHHHHHHCCCCCCEEEECCEEEEEEEECCC EKSVPIPDAIRAAITRAPTAA CCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA