| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is iorA [H]
Identifier: 34497128
GI number: 34497128
Start: 1813088
End: 1813540
Strand: Direct
Name: iorA [H]
Synonym: CV_1673
Alternate gene names: 34497128
Gene position: 1813088-1813540 (Clockwise)
Preceding gene: 34497127
Following gene: 34497129
Centisome position: 38.16
GC content: 67.11
Gene sequence:
>453_bases ATGAAGGTTTCCATCAACGGCAAGGCGGTGGAGCTCGGCTCCTCCCCCGACACGCCCCTGCTGTGGGCATTGCGCGACGA GCTGGGCCTGACCGGCACCAAGTTCGGCTGCGGCGCGGCGCTGTGCGGCGCCTGTACGGTGCTGAAGAACGGCCTGCCGA TACGTTCCTGCGTGACGCCGATTTCCTCACTGGCGGCGGACGACAGCATCACCACGGTGGAAGGCAACGCCGACAAGGTG GCGCAGGCGGTCAAGCAGGCCTGGCACGAGCTGGACGTGGTGCAGTGCGGCTTTTGCCAGAGCGGCCAGCTGCTGGCCGC CACCGCCTTGCTCAGCGCGAATCCTCATCCCTCCGATCAGGACATCGACCTGGCGATGAGCGGCAACCTATGCCGCTGCG GCACCTATCCCCGCATCCGCGCGGCCATCCACGCCGCCGCCAAACTGTTGTAG
Upstream 100 bases:
>100_bases CACCTATAGTGATTGCAGCGGCGCCTGGGCGCCGACACGCATCCGGACGGCGGCCATTCCATGGTCGTCGTCTTCTGTTT CTCGGCTCGGGAGGCAAGGC
Downstream 100 bases:
>100_bases GAGGCCGCGATGACGACCACCGGAGTTTCCCGCCGCGGTTTCCTGAAGATGAGCGGCGCGGTCGGCGGGGCGCTGTGCCT GGGCTTTGTCCTGAACGAGA
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKVSINGKAVELGSSPDTPLLWALRDELGLTGTKFGCGAALCGACTVLKNGLPIRSCVTPISSLAADDSITTVEGNADKV AQAVKQAWHELDVVQCGFCQSGQLLAATALLSANPHPSDQDIDLAMSGNLCRCGTYPRIRAAIHAAAKLL
Sequences:
>Translated_150_residues MKVSINGKAVELGSSPDTPLLWALRDELGLTGTKFGCGAALCGACTVLKNGLPIRSCVTPISSLAADDSITTVEGNADKV AQAVKQAWHELDVVQCGFCQSGQLLAATALLSANPHPSDQDIDLAMSGNLCRCGTYPRIRAAIHAAAKLL >Mature_150_residues MKVSINGKAVELGSSPDTPLLWALRDELGLTGTKFGCGAALCGACTVLKNGLPIRSCVTPISSLAADDSITTVEGNADKV AQAVKQAWHELDVVQCGFCQSGQLLAATALLSANPHPSDQDIDLAMSGNLCRCGTYPRIRAAIHAAAKLL
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=157, Percent_Identity=38.2165605095541, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=37.1951219512195, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1789232, Length=144, Percent_Identity=40.2777777777778, Blast_Score=88, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17540638, Length=155, Percent_Identity=39.3548387096774, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI32566215, Length=155, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=34.1935483870968, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17737937, Length=145, Percent_Identity=37.2413793103448, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=29.0123456790123, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 15533; Mature: 15533
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSINGKAVELGSSPDTPLLWALRDELGLTGTKFGCGAALCGACTVLKNGLPIRSCVTP CEEECCCCEEEECCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH ISSLAADDSITTVEGNADKVAQAVKQAWHELDVVQCGFCQSGQLLAATALLSANPHPSDQ HHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHCCCCCCCCC DIDLAMSGNLCRCGTYPRIRAAIHAAAKLL CEEEEECCCEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKVSINGKAVELGSSPDTPLLWALRDELGLTGTKFGCGAALCGACTVLKNGLPIRSCVTP CEEECCCCEEEECCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH ISSLAADDSITTVEGNADKVAQAVKQAWHELDVVQCGFCQSGQLLAATALLSANPHPSDQ HHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHCCCCCCCCC DIDLAMSGNLCRCGTYPRIRAAIHAAAKLL CEEEEECCCEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]