| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is iorB [H]
Identifier: 34497129
GI number: 34497129
Start: 1813550
End: 1815721
Strand: Direct
Name: iorB [H]
Synonym: CV_1674
Alternate gene names: 34497129
Gene position: 1813550-1815721 (Clockwise)
Preceding gene: 34497128
Following gene: 34497130
Centisome position: 38.17
GC content: 69.84
Gene sequence:
>2172_bases ATGACGACCACCGGAGTTTCCCGCCGCGGTTTCCTGAAGATGAGCGGCGCGGTCGGCGGGGCGCTGTGCCTGGGCTTTGT CCTGAACGAGAGGGGGGGCAAGGCCGAGGCGGCCGAGGCCAAGAGCGCCATCCCCGCCCCCAACGCCTTCGTCCGCATCG AGAAGGACGGCGGCGTCACCATCGTCAGCAACAAGTCGGAAATGGGGCAGGGCATCTACACCTCGCTGGCGATGCTGATC GCCGAGGAGCTGGAGTGCGACTGGAACCGGATCAAGGTGGTGTCGGCGCCGGCGGCTCCGGTCTATGTCCATACCGCCTT CCATATCCAGATCACCGGCGGCAGCACCAGCACGCTGTCCAGCTACGACCAGTACCGCAAGATAGGCGCCGCCGCGCGCG ACATGCTGATCGCGGCCGCCGCGCAACGCTGGCGGGTGCCGGCCTCGCAATGCCGCGCCGAAAACAGCCGAGTGTTCAAC AACGCCAACGGCGCCAGCCTGGGTTACGGCGAGCTGACCGAGGCCGCCGGCAAGTTGCCGGTGCCTGACACGGTGGAGCT GAAGCCGCGCCACCGCTGGAAGCTGCTGGGCACCCGCGTGCACCGGGTGGACGGCGACGAGAAGCTGGACGGCCGCGCGC AGTTCGCGATGGATGTCCGCTTGCCCGGCATGCTGACGGCGCTGGTCAAGCGCTGCCCCAGCTATGGCGGCAAACCCAAG GGCTTCAACGCCGACGCGGCCAGGGCGGTGCCCGGCGTCAGGGACGTGTTCGCGATCAGCAACGGCGTCGCCGTGCTGGC TGACGGTTTCTGGCCGGCCAAGAAGGCGCGCGATCTGTTGACCGTGGACTGGGATCATGGGCCGAATGCCGGGTTGGATT CTGCCAAGCTGCGCGCCGACTATCGCGCGCGCGCGGCCACGCCCGGGCAAACCTATCGCAGCGAGGGCGACGCCGAGGCC GCGCTGGCCGGCGCGGCCAAGAAGCTGGAAGCCTGGTACGAGGTGCCGTACCTGTCCCACTCGCCGATGGAGCCGCTCAA CTGCGTGGTCTGGCTGAAGCCCGGCAGCTGCCAGATCTGGAGCGGCACCCAGTCGCAGACGCTGGACGCCGGCATGGCCG CCGCAATGGCCGGGCTGAAGCCGGAGCAGGTCTCGCTGCACACCACCTTGCTGGGCGGCGGCTTCGGCCGGCGCGCGGTG CCGGCGGGGGCCGACTGGCTGAAGGAGGCGATGGAAGTGGCCAAGCGTCACGGCCAGGGCGCGCCGATCCGGCTGATGTG GACCCGCGACGACGATTTGGCCGGCGCCTACTACCGGCCGATGTGGCTGGACCGCGTGCGCGGCGGCATAGCCGCGGATG GCAAACCGGCCGCCTGGCTGCAGACCGGCGTCGGCCAGTCCATCATCGCCGGCACGCCGTTCGCGCCGATGATGATCAAG AACGGCATCGACGCGGTGTCGGTGGAGGGCACCGACGACATGCCCTACGCGCTGCCGGCGGTGGCGCTGGACCTGCACAC GGCGCAGACGCCGCTGCCGGTATTGTGGTGGCGCTCGGTCGGCCATTCCCACAGCGCCTTCACCAAGGAAAGCTATATCG ACGAATTGGCGCGGCTGGCGCGCCAGGACCCGGTCGCCTACCGGCTGGCGCTGCTGGGCAAGGCGCCGCGCGAGCAGGGC GTGCTGCGCGAGGCGGCGCGGATGGCCGGCTGGGGCCGCAAGCTGCCCAAGGGCCACGGCCTGGGCGCGGCGGTGCACAG CTCCTTCGGCTCCCATGTCGCCCAGGTGGTGGAGGTGTCGCTCAAGGGCAAGGAGCTGAAAGTCGAGCATGTCTGGTGCG CGATCGATTGCGGCGTGGTGGTCAACCCCGACCAGGTGGCGGCGCAGATGGAGGGCGGCATCCTGTTCGGCCTGTCGGCG GCGCTGTTCGGCGAGATCACCTTCAAGGACGGCGAGGTGGAGCAGAAGAATTTCGACGGCTACCCCATCGTCAGGATGTT CCAGGCGCCCAAGGTGGACGTTTCCATCGTCGCCAGCGAAGAGGCGCCGGGCGGCACCGGCGAGCCGGCGGTGCCGGTGG TGGCGCCGGCGCTGGCCAACGCCATCCACGCGGCTTCCGGCAAGCGGCTGCGAGAGCTGCCGCTGAGCCGGCACGGTTAC CAGGCGGTATGA
Upstream 100 bases:
>100_bases CATCGACCTGGCGATGAGCGGCAACCTATGCCGCTGCGGCACCTATCCCCGCATCCGCGCGGCCATCCACGCCGCCGCCA AACTGTTGTAGGAGGCCGCG
Downstream 100 bases:
>100_bases GGGAGGCCGACATGAACATCTCGACTGTCCTGTGCTGGGCGCTGGCCGCCTGGCTGCCGGCCGCCTGGGCGGCGGACGAT CCGGCCGCGTCGCGGCAGGC
Product: isoquinoline 1-oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MTTTGVSRRGFLKMSGAVGGALCLGFVLNERGGKAEAAEAKSAIPAPNAFVRIEKDGGVTIVSNKSEMGQGIYTSLAMLI AEELECDWNRIKVVSAPAAPVYVHTAFHIQITGGSTSTLSSYDQYRKIGAAARDMLIAAAAQRWRVPASQCRAENSRVFN NANGASLGYGELTEAAGKLPVPDTVELKPRHRWKLLGTRVHRVDGDEKLDGRAQFAMDVRLPGMLTALVKRCPSYGGKPK GFNADAARAVPGVRDVFAISNGVAVLADGFWPAKKARDLLTVDWDHGPNAGLDSAKLRADYRARAATPGQTYRSEGDAEA ALAGAAKKLEAWYEVPYLSHSPMEPLNCVVWLKPGSCQIWSGTQSQTLDAGMAAAMAGLKPEQVSLHTTLLGGGFGRRAV PAGADWLKEAMEVAKRHGQGAPIRLMWTRDDDLAGAYYRPMWLDRVRGGIAADGKPAAWLQTGVGQSIIAGTPFAPMMIK NGIDAVSVEGTDDMPYALPAVALDLHTAQTPLPVLWWRSVGHSHSAFTKESYIDELARLARQDPVAYRLALLGKAPREQG VLREAARMAGWGRKLPKGHGLGAAVHSSFGSHVAQVVEVSLKGKELKVEHVWCAIDCGVVVNPDQVAAQMEGGILFGLSA ALFGEITFKDGEVEQKNFDGYPIVRMFQAPKVDVSIVASEEAPGGTGEPAVPVVAPALANAIHAASGKRLRELPLSRHGY QAV
Sequences:
>Translated_723_residues MTTTGVSRRGFLKMSGAVGGALCLGFVLNERGGKAEAAEAKSAIPAPNAFVRIEKDGGVTIVSNKSEMGQGIYTSLAMLI AEELECDWNRIKVVSAPAAPVYVHTAFHIQITGGSTSTLSSYDQYRKIGAAARDMLIAAAAQRWRVPASQCRAENSRVFN NANGASLGYGELTEAAGKLPVPDTVELKPRHRWKLLGTRVHRVDGDEKLDGRAQFAMDVRLPGMLTALVKRCPSYGGKPK GFNADAARAVPGVRDVFAISNGVAVLADGFWPAKKARDLLTVDWDHGPNAGLDSAKLRADYRARAATPGQTYRSEGDAEA ALAGAAKKLEAWYEVPYLSHSPMEPLNCVVWLKPGSCQIWSGTQSQTLDAGMAAAMAGLKPEQVSLHTTLLGGGFGRRAV PAGADWLKEAMEVAKRHGQGAPIRLMWTRDDDLAGAYYRPMWLDRVRGGIAADGKPAAWLQTGVGQSIIAGTPFAPMMIK NGIDAVSVEGTDDMPYALPAVALDLHTAQTPLPVLWWRSVGHSHSAFTKESYIDELARLARQDPVAYRLALLGKAPREQG VLREAARMAGWGRKLPKGHGLGAAVHSSFGSHVAQVVEVSLKGKELKVEHVWCAIDCGVVVNPDQVAAQMEGGILFGLSA ALFGEITFKDGEVEQKNFDGYPIVRMFQAPKVDVSIVASEEAPGGTGEPAVPVVAPALANAIHAASGKRLRELPLSRHGY QAV >Mature_722_residues TTTGVSRRGFLKMSGAVGGALCLGFVLNERGGKAEAAEAKSAIPAPNAFVRIEKDGGVTIVSNKSEMGQGIYTSLAMLIA EELECDWNRIKVVSAPAAPVYVHTAFHIQITGGSTSTLSSYDQYRKIGAAARDMLIAAAAQRWRVPASQCRAENSRVFNN ANGASLGYGELTEAAGKLPVPDTVELKPRHRWKLLGTRVHRVDGDEKLDGRAQFAMDVRLPGMLTALVKRCPSYGGKPKG FNADAARAVPGVRDVFAISNGVAVLADGFWPAKKARDLLTVDWDHGPNAGLDSAKLRADYRARAATPGQTYRSEGDAEAA LAGAAKKLEAWYEVPYLSHSPMEPLNCVVWLKPGSCQIWSGTQSQTLDAGMAAAMAGLKPEQVSLHTTLLGGGFGRRAVP AGADWLKEAMEVAKRHGQGAPIRLMWTRDDDLAGAYYRPMWLDRVRGGIAADGKPAAWLQTGVGQSIIAGTPFAPMMIKN GIDAVSVEGTDDMPYALPAVALDLHTAQTPLPVLWWRSVGHSHSAFTKESYIDELARLARQDPVAYRLALLGKAPREQGV LREAARMAGWGRKLPKGHGLGAAVHSSFGSHVAQVVEVSLKGKELKVEHVWCAIDCGVVVNPDQVAAQMEGGILFGLSAA LFGEITFKDGEVEQKNFDGYPIVRMFQAPKVDVSIVASEEAPGGTGEPAVPVVAPALANAIHAASGKRLRELPLSRHGYQ AV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 77096; Mature: 76965
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTGVSRRGFLKMSGAVGGALCLGFVLNERGGKAEAAEAKSAIPAPNAFVRIEKDGGVT CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCEE IVSNKSEMGQGIYTSLAMLIAEELECDWNRIKVVSAPAAPVYVHTAFHIQITGGSTSTLS EEECHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCHHHH SYDQYRKIGAAARDMLIAAAAQRWRVPASQCRAENSRVFNNANGASLGYGELTEAAGKLP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCC VPDTVELKPRHRWKLLGTRVHRVDGDEKLDGRAQFAMDVRLPGMLTALVKRCPSYGGKPK CCCCEECCCCCHHHHHCCEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCC GFNADAARAVPGVRDVFAISNGVAVLADGFWPAKKARDLLTVDWDHGPNAGLDSAKLRAD CCCCCHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHH YRARAATPGQTYRSEGDAEAALAGAAKKLEAWYEVPYLSHSPMEPLNCVVWLKPGSCQIW HHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEE SGTQSQTLDAGMAAAMAGLKPEQVSLHTTLLGGGFGRRAVPAGADWLKEAMEVAKRHGQG CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC APIRLMWTRDDDLAGAYYRPMWLDRVRGGIAADGKPAAWLQTGVGQSIIAGTPFAPMMIK CCEEEEEECCCCCCCCEECHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECCCCCCHHHHH NGIDAVSVEGTDDMPYALPAVALDLHTAQTPLPVLWWRSVGHSHSAFTKESYIDELARLA CCCCEEEECCCCCCCCHHHHHEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH RQDPVAYRLALLGKAPREQGVLREAARMAGWGRKLPKGHGLGAAVHSSFGSHVAQVVEVS HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKGKELKVEHVWCAIDCGVVVNPDQVAAQMEGGILFGLSAALFGEITFKDGEVEQKNFDG CCCCEEEEEEEEEEEECCEEECHHHHHHHHCCCEEEEEHHHHHEEEEECCCCCCCCCCCC YPIVRMFQAPKVDVSIVASEEAPGGTGEPAVPVVAPALANAIHAASGKRLRELPLSRHGY CCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCC QAV CCC >Mature Secondary Structure TTTGVSRRGFLKMSGAVGGALCLGFVLNERGGKAEAAEAKSAIPAPNAFVRIEKDGGVT CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCEE IVSNKSEMGQGIYTSLAMLIAEELECDWNRIKVVSAPAAPVYVHTAFHIQITGGSTSTLS EEECHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCHHHH SYDQYRKIGAAARDMLIAAAAQRWRVPASQCRAENSRVFNNANGASLGYGELTEAAGKLP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCC VPDTVELKPRHRWKLLGTRVHRVDGDEKLDGRAQFAMDVRLPGMLTALVKRCPSYGGKPK CCCCEECCCCCHHHHHCCEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCC GFNADAARAVPGVRDVFAISNGVAVLADGFWPAKKARDLLTVDWDHGPNAGLDSAKLRAD CCCCCHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHH YRARAATPGQTYRSEGDAEAALAGAAKKLEAWYEVPYLSHSPMEPLNCVVWLKPGSCQIW HHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEE SGTQSQTLDAGMAAAMAGLKPEQVSLHTTLLGGGFGRRAVPAGADWLKEAMEVAKRHGQG CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC APIRLMWTRDDDLAGAYYRPMWLDRVRGGIAADGKPAAWLQTGVGQSIIAGTPFAPMMIK CCEEEEEECCCCCCCCEECHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECCCCCCHHHHH NGIDAVSVEGTDDMPYALPAVALDLHTAQTPLPVLWWRSVGHSHSAFTKESYIDELARLA CCCCEEEECCCCCCCCHHHHHEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH RQDPVAYRLALLGKAPREQGVLREAARMAGWGRKLPKGHGLGAAVHSSFGSHVAQVVEVS HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKGKELKVEHVWCAIDCGVVVNPDQVAAQMEGGILFGLSAALFGEITFKDGEVEQKNFDG CCCCEEEEEEEEEEEECCEEECHHHHHHHHCCCEEEEEHHHHHEEEEECCCCCCCCCCCC YPIVRMFQAPKVDVSIVASEEAPGGTGEPAVPVVAPALANAIHAASGKRLRELPLSRHGY CCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCC QAV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]