| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497126
Identifier: 34497126
GI number: 34497126
Start: 1810947
End: 1811657
Strand: Direct
Name: 34497126
Synonym: CV_1671
Alternate gene names: NA
Gene position: 1810947-1811657 (Clockwise)
Preceding gene: 34497125
Following gene: 34497127
Centisome position: 38.12
GC content: 70.32
Gene sequence:
>711_bases ATGGCGAAGTGGCGAGTGGCGGCGATCCTGTCCGGCGCCTTGCTGGCGGCGGATGCCCGGGCTGAAGCCTTGCGCATGCT GCTGACGCAAATCCCCGGCATCATCGAGCAGGCGCCCGATGGAGCGTCCATGCGCGGCGTTGGCATCGACCTGATGAAAG AGGTGGGGCGCCGGGCCGGCGTGGAATTGCGTTTCGAAGCCTATCCACAGGCCCGCGCGCGGCTGCTGGTGGAGCGGCAG CGCGATGCCTGCCTGCCGGTGGCGCATCTGCCGGAGCAGGCGGCGAATTTCAAATGGAGCGCCCCGCTGCTGCAGATGCG CCTGGTCTTGCTGGCCAGGGGGGACGATGGCCGCCAGCTGCGCAGCCTGGAGCAGGCGGGGGGGCTGCGGGTGGGGGCGA TGCGCGGCACCATGGCGGCGGCGCGCCTGAAAGAGCGGGGCGTGGCGGTGGAGGAAAGCGCCGATTACCTGAGCGGCCTG GAGAAGCTGAGGCTGGGCCGGCTGGATCTGTGGGCGATGCTGGATGTCGGCGTCGCGTCGCTGGCCCGGCGTCTGGAAAT GCCGCCGCCCAGGGTGGCCTGGGTGATGGATACGCTGGACGTGTCCTTCGCCTGCAACCGGCAAGTGGACGACGCGCTGA TCGCCCGGCTGGATGGCGCCATCGCCGCGATGCGCGCCGACGGCAGCATGGCCCGTTTCGATCTGCGCTGA
Upstream 100 bases:
>100_bases TCATGGTGGCCAGCTTCCGCTGATGGCGGCATGAGAAGACGGGGAGCGGCGGCTCCCCGTTTTGCTATGGTTCAGACAGT ACGGACGGTCTGGAGTAGCC
Downstream 100 bases:
>100_bases CGGCGGGCATGCCAAATGGGCCCGCGCTGGGCTACACTGCCGTTTTTGCCAGTCTGCGAGAACACCTTGAACGCCCGTCT GACCCTGCTGGCAGGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transporter
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAKWRVAAILSGALLAADARAEALRMLLTQIPGIIEQAPDGASMRGVGIDLMKEVGRRAGVELRFEAYPQARARLLVERQ RDACLPVAHLPEQAANFKWSAPLLQMRLVLLARGDDGRQLRSLEQAGGLRVGAMRGTMAAARLKERGVAVEESADYLSGL EKLRLGRLDLWAMLDVGVASLARRLEMPPPRVAWVMDTLDVSFACNRQVDDALIARLDGAIAAMRADGSMARFDLR
Sequences:
>Translated_236_residues MAKWRVAAILSGALLAADARAEALRMLLTQIPGIIEQAPDGASMRGVGIDLMKEVGRRAGVELRFEAYPQARARLLVERQ RDACLPVAHLPEQAANFKWSAPLLQMRLVLLARGDDGRQLRSLEQAGGLRVGAMRGTMAAARLKERGVAVEESADYLSGL EKLRLGRLDLWAMLDVGVASLARRLEMPPPRVAWVMDTLDVSFACNRQVDDALIARLDGAIAAMRADGSMARFDLR >Mature_235_residues AKWRVAAILSGALLAADARAEALRMLLTQIPGIIEQAPDGASMRGVGIDLMKEVGRRAGVELRFEAYPQARARLLVERQR DACLPVAHLPEQAANFKWSAPLLQMRLVLLARGDDGRQLRSLEQAGGLRVGAMRGTMAAARLKERGVAVEESADYLSGLE KLRLGRLDLWAMLDVGVASLARRLEMPPPRVAWVMDTLDVSFACNRQVDDALIARLDGAIAAMRADGSMARFDLR
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25782; Mature: 25650
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWRVAAILSGALLAADARAEALRMLLTQIPGIIEQAPDGASMRGVGIDLMKEVGRRAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHCC VELRFEAYPQARARLLVERQRDACLPVAHLPEQAANFKWSAPLLQMRLVLLARGDDGRQL CEEEEECCHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHH RSLEQAGGLRVGAMRGTMAAARLKERGVAVEESADYLSGLEKLRLGRLDLWAMLDVGVAS HHHHHHCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LARRLEMPPPRVAWVMDTLDVSFACNRQVDDALIARLDGAIAAMRADGSMARFDLR HHHHHCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHEEECCCCCEEECCC >Mature Secondary Structure AKWRVAAILSGALLAADARAEALRMLLTQIPGIIEQAPDGASMRGVGIDLMKEVGRRAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHCC VELRFEAYPQARARLLVERQRDACLPVAHLPEQAANFKWSAPLLQMRLVLLARGDDGRQL CEEEEECCHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHH RSLEQAGGLRVGAMRGTMAAARLKERGVAVEESADYLSGLEKLRLGRLDLWAMLDVGVAS HHHHHHCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LARRLEMPPPRVAWVMDTLDVSFACNRQVDDALIARLDGAIAAMRADGSMARFDLR HHHHHCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA