Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34497116

Identifier: 34497116

GI number: 34497116

Start: 1798492

End: 1800195

Strand: Direct

Name: 34497116

Synonym: CV_1661

Alternate gene names: NA

Gene position: 1798492-1800195 (Clockwise)

Preceding gene: 34497115

Following gene: 34497121

Centisome position: 37.85

GC content: 66.78

Gene sequence:

>1704_bases
GTGCCGTCTGCGTCGGCGCGCCTTGCCTCAGCCGTAAAACTGGGTTTTGTAAGCCATTCTAGGCGCTGCCGGCGGAATGT
CCGGAGGCTTTCGGATATTCCGCCGAATTCGCCGGCCGCGCGCGACGCGGCTGGCCGCGGGCGGGAGGGGCCGCCCAGGC
GGACCGGCACCCGGAAGCCGGTCCGCTTTTCAATAAAAGGGCCTGCTCGGGCCCTACCAACCGGGAATGTTCCGGCAGCC
GCGGCTGCGTTTTGGCATCACGGGCATCTGCTCGTTCGGGAAGGACTGATGAATAAAAAACTGATTGCACTGGCGGGAGG
CTTGCTGCTCCCCGCGTTCGCCCGCGCCGCCGATCTGGACGGCGCCACGCTCGGCCTGGCCTGGGGCGTGCCGTTCGCCG
GCATCCTGCTGTCCATCGCGCTGTTTCCGATGCTGGCTCCCGGCATCTGGCACCACCATTTCGGCAAGATCACCGCGGTC
TGGACCGCGCTGTTCCTGCTGCCTTTCGCCGCGGCCTTCGGGCTGGGCCACGCCGGCGCGCTGGTGCTGCACGCGCTGTT
CACCGAATACATCCCCTTCATCGTGCTGCTGTTCGCGCTGTACACGGTGTCGGGCGGCATCCTGGTGTGGGGCTCGCTGC
ACGCGTCGCCCCGGCTGAACACTGTCATCCTGGCCATCGGCACCGCGCTGGCGTCGGTCATGGGCACCACCGGCGCGGCG
ATGCTGCTGATCCGGCCGCTGCTGCGCGCCAACGAGGGCCGCAAGCGCAATGTGCACGTGGTGGTGTTCTTCATCTTCCT
GGTGGCCAATGTCGGCGGCGGCCTGACGCCGCTGGGCGATCCGCCGCTGTTCCTCGGCTTTCTGAAGGGCGTGACCTTCG
GCTGGACCTTCCAGCACATGCTGGCCCCGGTGCTGTTGCTGTCGGCGCTGCTGCTGGCCATTTTCTACTTCCTGGACCGC
CACATGTTCGCCAAGGAGGCGAAGGAAGGCACGCTCAAACCGGTGGACACCAGCCACGACAAGCCGCTGAAGCTGCACGG
CAAGCGCAATTTCTGGCTGCTGGCCGGCGTGGTGGGCGCGGTGCTGATGTCCGGCCTGTGGAAGCCCGGCATCGCCTTCG
CGCTGCCCGGCGTCCACCTGGAGCTGCAGAACCTGCTGCGCGACGGGATCCTGCTGCTGCTGGCTTTCGCCTCGCTGTGG
ATCACGCCCAAGCAGGTGCGCGCCGGCAACGAGTTCAACTGGCTGCCCATTCTGGAAGTGGGCAAGCTGTTCGCCGGCAT
CTTCATCACCATCGCGCCGGTGATCGCCATCCTGCGCGCCGGCGACCACGGCGCGCTGGCCGGCCTGGTGCAGGCCGTGT
CCGGCCCCGATGGCAAGCCGCTGGACGGCATGTACTTCTGGATGACCGGCATCCTGTCCAGCTTCCTGGACAACGCGCCG
ACCTATCTGGTGTTCTTCAACCTGGCGTCCGGCGACGCCGCCGAACTGATGGGCCCGTTCGCCAGCACCTTGCTGGCCAT
CTCGATGGGCGCCGTGTTCATGGGGGCGATGACCTATATCGGCAACGCGCCCAACTTCATGGTCAAGGCCATCGCCGAGC
ACCGCCACGTCAGGATGCCGGGCTTCTTCGGCTACATGCTGTGGTCCGGCGCCGTGCTGCTGCCGTGCTTCGCGCTGCTG
ACGCTGGTGTTCTTCCACTTCTGA

Upstream 100 bases:

>100_bases
ACCCGGACGGCTACAAGATCGAGTTCATCCAGAAAGGCAGCCGCTAAGAGCGGCTAACAAAACCCCTGATGCTGCGTGGC
GCCGGCTTGCCGTACGGCTT

Downstream 100 bases:

>100_bases
TTCTGTTGGGTCGGCAATCAAAAAGCCCATCGCGTTTGCGATGGGCTTTTTTGTTGGACAAGAGGGAGGTCAGGCTTTGG
CGGCGGCGGGCTCCAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MPSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKPVRFSIKGPARALPTGNVPAA
AAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLDGATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAV
WTALFLLPFAAAFGLGHAGALVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA
MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHMLAPVLLLSALLLAIFYFLDR
HMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGAVLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLW
ITPKQVRAGNEFNWLPILEVGKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP
TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMPGFFGYMLWSGAVLLPCFALL
TLVFFHF

Sequences:

>Translated_567_residues
MPSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKPVRFSIKGPARALPTGNVPAA
AAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLDGATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAV
WTALFLLPFAAAFGLGHAGALVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA
MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHMLAPVLLLSALLLAIFYFLDR
HMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGAVLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLW
ITPKQVRAGNEFNWLPILEVGKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP
TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMPGFFGYMLWSGAVLLPCFALL
TLVFFHF
>Mature_566_residues
PSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKPVRFSIKGPARALPTGNVPAAA
AAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLDGATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAVW
TALFLLPFAAAFGLGHAGALVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAAM
LLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHMLAPVLLLSALLLAIFYFLDRH
MFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGAVLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLWI
TPKQVRAGNEFNWLPILEVGKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAPT
YLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMPGFFGYMLWSGAVLLPCFALLT
LVFFHF

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60864; Mature: 60733

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRFSIKGPARALPTGNVPAAAAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLD
EEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHCCCC
GATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAVWTALFLLPFAAAFGLGHAGA
CCCEEHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHH
MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHM
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
LAPVLLLSALLLAIFYFLDRHMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
VLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLWITPKQVRAGNEFNWLPILEV
HHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHH
GKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMP
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
GFFGYMLWSGAVLLPCFALLTLVFFHF
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRFSIKGPARALPTGNVPAAAAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLD
EEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHCCCC
GATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAVWTALFLLPFAAAFGLGHAGA
CCCEEHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHH
MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHM
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
LAPVLLLSALLLAIFYFLDRHMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
VLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLWITPKQVRAGNEFNWLPILEV
HHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHH
GKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMP
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
GFFGYMLWSGAVLLPCFALLTLVFFHF
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA