| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497116
Identifier: 34497116
GI number: 34497116
Start: 1798492
End: 1800195
Strand: Direct
Name: 34497116
Synonym: CV_1661
Alternate gene names: NA
Gene position: 1798492-1800195 (Clockwise)
Preceding gene: 34497115
Following gene: 34497121
Centisome position: 37.85
GC content: 66.78
Gene sequence:
>1704_bases GTGCCGTCTGCGTCGGCGCGCCTTGCCTCAGCCGTAAAACTGGGTTTTGTAAGCCATTCTAGGCGCTGCCGGCGGAATGT CCGGAGGCTTTCGGATATTCCGCCGAATTCGCCGGCCGCGCGCGACGCGGCTGGCCGCGGGCGGGAGGGGCCGCCCAGGC GGACCGGCACCCGGAAGCCGGTCCGCTTTTCAATAAAAGGGCCTGCTCGGGCCCTACCAACCGGGAATGTTCCGGCAGCC GCGGCTGCGTTTTGGCATCACGGGCATCTGCTCGTTCGGGAAGGACTGATGAATAAAAAACTGATTGCACTGGCGGGAGG CTTGCTGCTCCCCGCGTTCGCCCGCGCCGCCGATCTGGACGGCGCCACGCTCGGCCTGGCCTGGGGCGTGCCGTTCGCCG GCATCCTGCTGTCCATCGCGCTGTTTCCGATGCTGGCTCCCGGCATCTGGCACCACCATTTCGGCAAGATCACCGCGGTC TGGACCGCGCTGTTCCTGCTGCCTTTCGCCGCGGCCTTCGGGCTGGGCCACGCCGGCGCGCTGGTGCTGCACGCGCTGTT CACCGAATACATCCCCTTCATCGTGCTGCTGTTCGCGCTGTACACGGTGTCGGGCGGCATCCTGGTGTGGGGCTCGCTGC ACGCGTCGCCCCGGCTGAACACTGTCATCCTGGCCATCGGCACCGCGCTGGCGTCGGTCATGGGCACCACCGGCGCGGCG ATGCTGCTGATCCGGCCGCTGCTGCGCGCCAACGAGGGCCGCAAGCGCAATGTGCACGTGGTGGTGTTCTTCATCTTCCT GGTGGCCAATGTCGGCGGCGGCCTGACGCCGCTGGGCGATCCGCCGCTGTTCCTCGGCTTTCTGAAGGGCGTGACCTTCG GCTGGACCTTCCAGCACATGCTGGCCCCGGTGCTGTTGCTGTCGGCGCTGCTGCTGGCCATTTTCTACTTCCTGGACCGC CACATGTTCGCCAAGGAGGCGAAGGAAGGCACGCTCAAACCGGTGGACACCAGCCACGACAAGCCGCTGAAGCTGCACGG CAAGCGCAATTTCTGGCTGCTGGCCGGCGTGGTGGGCGCGGTGCTGATGTCCGGCCTGTGGAAGCCCGGCATCGCCTTCG CGCTGCCCGGCGTCCACCTGGAGCTGCAGAACCTGCTGCGCGACGGGATCCTGCTGCTGCTGGCTTTCGCCTCGCTGTGG ATCACGCCCAAGCAGGTGCGCGCCGGCAACGAGTTCAACTGGCTGCCCATTCTGGAAGTGGGCAAGCTGTTCGCCGGCAT CTTCATCACCATCGCGCCGGTGATCGCCATCCTGCGCGCCGGCGACCACGGCGCGCTGGCCGGCCTGGTGCAGGCCGTGT CCGGCCCCGATGGCAAGCCGCTGGACGGCATGTACTTCTGGATGACCGGCATCCTGTCCAGCTTCCTGGACAACGCGCCG ACCTATCTGGTGTTCTTCAACCTGGCGTCCGGCGACGCCGCCGAACTGATGGGCCCGTTCGCCAGCACCTTGCTGGCCAT CTCGATGGGCGCCGTGTTCATGGGGGCGATGACCTATATCGGCAACGCGCCCAACTTCATGGTCAAGGCCATCGCCGAGC ACCGCCACGTCAGGATGCCGGGCTTCTTCGGCTACATGCTGTGGTCCGGCGCCGTGCTGCTGCCGTGCTTCGCGCTGCTG ACGCTGGTGTTCTTCCACTTCTGA
Upstream 100 bases:
>100_bases ACCCGGACGGCTACAAGATCGAGTTCATCCAGAAAGGCAGCCGCTAAGAGCGGCTAACAAAACCCCTGATGCTGCGTGGC GCCGGCTTGCCGTACGGCTT
Downstream 100 bases:
>100_bases TTCTGTTGGGTCGGCAATCAAAAAGCCCATCGCGTTTGCGATGGGCTTTTTTGTTGGACAAGAGGGAGGTCAGGCTTTGG CGGCGGCGGGCTCCAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MPSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKPVRFSIKGPARALPTGNVPAA AAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLDGATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAV WTALFLLPFAAAFGLGHAGALVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHMLAPVLLLSALLLAIFYFLDR HMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGAVLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLW ITPKQVRAGNEFNWLPILEVGKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMPGFFGYMLWSGAVLLPCFALL TLVFFHF
Sequences:
>Translated_567_residues MPSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKPVRFSIKGPARALPTGNVPAA AAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLDGATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAV WTALFLLPFAAAFGLGHAGALVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHMLAPVLLLSALLLAIFYFLDR HMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGAVLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLW ITPKQVRAGNEFNWLPILEVGKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMPGFFGYMLWSGAVLLPCFALL TLVFFHF >Mature_566_residues PSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKPVRFSIKGPARALPTGNVPAAA AAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLDGATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAVW TALFLLPFAAAFGLGHAGALVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAAM LLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHMLAPVLLLSALLLAIFYFLDRH MFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGAVLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLWI TPKQVRAGNEFNWLPILEVGKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAPT YLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMPGFFGYMLWSGAVLLPCFALLT LVFFHF
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60864; Mature: 60733
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VRFSIKGPARALPTGNVPAAAAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLD EEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHCCCC GATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAVWTALFLLPFAAAFGLGHAGA CCCEEHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHH MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHM HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH LAPVLLLSALLLAIFYFLDRHMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH VLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLWITPKQVRAGNEFNWLPILEV HHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHH GKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMP EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC GFFGYMLWSGAVLLPCFALLTLVFFHF HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSASARLASAVKLGFVSHSRRCRRNVRRLSDIPPNSPAARDAAGRGREGPPRRTGTRKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VRFSIKGPARALPTGNVPAAAAAFWHHGHLLVREGLMNKKLIALAGGLLLPAFARAADLD EEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHCCCC GATLGLAWGVPFAGILLSIALFPMLAPGIWHHHFGKITAVWTALFLLPFAAAFGLGHAGA CCCEEHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LVLHALFTEYIPFIVLLFALYTVSGGILVWGSLHASPRLNTVILAIGTALASVMGTTGAA HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHH MLLIRPLLRANEGRKRNVHVVVFFIFLVANVGGGLTPLGDPPLFLGFLKGVTFGWTFQHM HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH LAPVLLLSALLLAIFYFLDRHMFAKEAKEGTLKPVDTSHDKPLKLHGKRNFWLLAGVVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH VLMSGLWKPGIAFALPGVHLELQNLLRDGILLLLAFASLWITPKQVRAGNEFNWLPILEV HHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHH GKLFAGIFITIAPVIAILRAGDHGALAGLVQAVSGPDGKPLDGMYFWMTGILSSFLDNAP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC TYLVFFNLASGDAAELMGPFASTLLAISMGAVFMGAMTYIGNAPNFMVKAIAEHRHVRMP EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC GFFGYMLWSGAVLLPCFALLTLVFFHF HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA