| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gmhB [H]
Identifier: 34497112
GI number: 34497112
Start: 1796027
End: 1796566
Strand: Direct
Name: gmhB [H]
Synonym: CV_1657
Alternate gene names: 34497112
Gene position: 1796027-1796566 (Clockwise)
Preceding gene: 34497111
Following gene: 34497113
Centisome position: 37.8
GC content: 65.0
Gene sequence:
>540_bases GTGAAGCTAGTCATTCTCGACCGCGACGGCGTGATCAACGAGGATCGCGACGATTTCGTGAAGAACACCATCGAGTGGGT GCCCTTGGAGCACAGCCTGGAGGCGATCGCCAATCTGACCCAGTCCGGCTGGCGCGTGGTGGTGGCGACCAACCAGTCCG GCATCGCCCGCGGCCTGTTCGACATGCATGCGCTGAACGCGATGCACGAGAAGATGCACCGCCTGGTCGGCCAGGCCGGC GGCCGCATCGACGCGGTGGTGTTCTGTCCGCACAGCGCGGATCACGGCTGCGAGTGCCGCAAGCCGCTGCCCGGCATGGT GCTGGAGATCGCCGAACGCTTCAACGTCAAGCTGGAAGGCCTGCCGATGATAGGCGACAGTCTGCGCGACCTGGAGGCGA TCGCCGCCGTCGGCGGCCAGCCCATTCTGGTGAAGACCGGCAAGGGCGCCAAGACGCTGGCCAAGGGCGGCCTGCCGGAG AGCACGCTGGTGTTCAACGACTTGTACGATGCCGCCGAGCATCTGATCAACCATCATTGA
Upstream 100 bases:
>100_bases AGGCCCGGCTGTGCCGGGCGTTCCGCCAAGCTCGCAGTCGACGGGAATACAAACGGCGGAACGCCCCGGCGGGGCTTCCG CCCTACTCATTGGAGAGAGC
Downstream 100 bases:
>100_bases GGCAGAGACTGAAAGCATGATCGGCTTGTGGATACGCAATCTGTTGTACTGGGTGGTGCTCATCGTCATCACACCGGTGT TCTTCCTGCTGCTGATGCTG
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: L-histidinol; phosphate
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKLVILDRDGVINEDRDDFVKNTIEWVPLEHSLEAIANLTQSGWRVVVATNQSGIARGLFDMHALNAMHEKMHRLVGQAG GRIDAVVFCPHSADHGCECRKPLPGMVLEIAERFNVKLEGLPMIGDSLRDLEAIAAVGGQPILVKTGKGAKTLAKGGLPE STLVFNDLYDAAEHLINHH
Sequences:
>Translated_179_residues MKLVILDRDGVINEDRDDFVKNTIEWVPLEHSLEAIANLTQSGWRVVVATNQSGIARGLFDMHALNAMHEKMHRLVGQAG GRIDAVVFCPHSADHGCECRKPLPGMVLEIAERFNVKLEGLPMIGDSLRDLEAIAAVGGQPILVKTGKGAKTLAKGGLPE STLVFNDLYDAAEHLINHH >Mature_179_residues MKLVILDRDGVINEDRDDFVKNTIEWVPLEHSLEAIANLTQSGWRVVVATNQSGIARGLFDMHALNAMHEKMHRLVGQAG GRIDAVVFCPHSADHGCECRKPLPGMVLEIAERFNVKLEGLPMIGDSLRDLEAIAAVGGQPILVKTGKGAKTLAKGGLPE STLVFNDLYDAAEHLINHH
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=175, Percent_Identity=33.1428571428571, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082027, Length=139, Percent_Identity=26.6187050359712, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: 3.1.3.15
Molecular weight: Translated: 19518; Mature: 19518
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVILDRDGVINEDRDDFVKNTIEWVPLEHSLEAIANLTQSGWRVVVATNQSGIARGLF CEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH DMHALNAMHEKMHRLVGQAGGRIDAVVFCPHSADHGCECRKPLPGMVLEIAERFNVKLEG HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEECC LPMIGDSLRDLEAIAAVGGQPILVKTGKGAKTLAKGGLPESTLVFNDLYDAAEHLINHH CCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLVILDRDGVINEDRDDFVKNTIEWVPLEHSLEAIANLTQSGWRVVVATNQSGIARGLF CEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH DMHALNAMHEKMHRLVGQAGGRIDAVVFCPHSADHGCECRKPLPGMVLEIAERFNVKLEG HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEECC LPMIGDSLRDLEAIAAVGGQPILVKTGKGAKTLAKGGLPESTLVFNDLYDAAEHLINHH CCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-histidinol phosphate; H2O
Specific reaction: L-histidinol phosphate + H2O = L-histidinol + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919; 12101286 [H]