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The map label for this gene is recA

Identifier: 34497062

GI number: 34497062

Start: 1733775

End: 1734827

Strand: Reverse

Name: recA

Synonym: CV_1607

Alternate gene names: 34497062

Gene position: 1734827-1733775 (Counterclockwise)

Preceding gene: 34497069

Following gene: 34497061

Centisome position: 36.51

GC content: 63.34

Gene sequence:

>1053_bases
ATGGCTTCCGAAGACAAGAGCAAGGCGCTGGCCGCTGCCCTGGCCCAGATTGAAAAGCAATTTGGCAAGGGCTCGATCAT
GCGCATGAGCGACAACCAGATCACCGAAAACCTGCAAGTGATCTCCACCGGCTCGCTGACCCTGGACCTGGCGCTGGGCG
TCGGCGGCCTGCCGCGCGGCCGCGTGGTCGAAATCTACGGCCCGGAGTCGTCGGGTAAAACCACCTTGTGTCTGCAGGCC
GTGGCCGAGGCGCAAAAACTGGGCGGCACCTGCGCCTACATCGACGCCGAAAACGCGCTGGACCCGGTTTACGCGCAGAA
GCTGGGCGTCAACGTCGAAGACCTGCTGATCTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCTGCGACATGCTGG
TTCGCTCCAGCGGCGTGGACGTGATCGTGGTCGACTCCGTCGCCGCGCTGGTGCCCAAGGCTGAAATCGAGGGCGAGATG
GGCGACAGCCACGTCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGGCAACATCAAGCGCACCAA
CACCCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAACCCGGAAACCACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCCTCCGTGCGCCTGGACATCCGCCGCACCGGCGGCATCAAGAAGGGCGACGAAGTGATCGGC
AACGACACTCGCGTCAAAGTGGTGAAGAACAAGGTGTCCCCGCCGTTCCGCCAGGCCGATTTCGAAATCCTGTACGGCGA
GGGCATCTCGCGCCAGGGCGAAATCATCGAGCTGGGCGTCAAGCACGGCTTCATCGACAAGTCCGGCGCCTGGTACGCGT
ACAACGGCCAGAAGATCGGCCAGGGCAAGGACAACACCCGCGAATGGCTGAAAGCCAACCCGGCCATCGCCGACGAGATC
GAGCGCAAGATCCGCGAAGCGGTGGGCGTGAAGATCGAAATCAACGAAAACCAGGGCGACGAAGAGTTCGCCGACGACGC
CTTCGACGCCTGA

Upstream 100 bases:

>100_bases
ACCATGGCACGAAAACCGCGGCCCCAAGCTGCTGTTGGCCCAGCTTTTTTCTGCGATAATCGCCCCCATCATTGGTCCGA
CTACCCCATTTGGAGACAGC

Downstream 100 bases:

>100_bases
TGGCGGCGGAAGGCAAAAGCCTGAAGGCGCGGGCCGCCGAACTGCTGTCCCGCCGGGAATACACCCGGCAGGAACTGGTT
CGGCGGCTCGCGCCTTTTGC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MASEDKSKALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTTLCLQA
VAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEM
GDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGGIKKGDEVIG
NDTRVKVVKNKVSPPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIGQGKDNTREWLKANPAIADEI
ERKIREAVGVKIEINENQGDEEFADDAFDA

Sequences:

>Translated_350_residues
MASEDKSKALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTTLCLQA
VAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEM
GDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGGIKKGDEVIG
NDTRVKVVKNKVSPPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIGQGKDNTREWLKANPAIADEI
ERKIREAVGVKIEINENQGDEEFADDAFDA
>Mature_349_residues
ASEDKSKALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTTLCLQAV
AEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGGIKKGDEVIGN
DTRVKVVKNKVSPPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIGQGKDNTREWLKANPAIADEIE
RKIREAVGVKIEINENQGDEEFADDAFDA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=323, Percent_Identity=72.1362229102167, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CHRVO (Q7NXL9)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901277.1
- ProteinModelPortal:   Q7NXL9
- SMR:   Q7NXL9
- GeneID:   2547577
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1607
- NMPDR:   fig|243365.1.peg.1607
- HOGENOM:   HBG339889
- OMA:   IEINENQ
- PhylomeDB:   Q7NXL9
- ProtClustDB:   PRK09354
- BioCyc:   CVIO243365:CV_1607-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37816; Mature: 37684

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEDKSKALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRG
CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCEEEEEECCEEEEEEECCCCCCCC
RVVEIYGPESSGKTTLCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQP
CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHHEECCC
DTGEQALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLT
CCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGGIKKGDEVIG
CCCEECCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCC
NDTRVKVVKNKVSPPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIG
CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCEECC
QGKDNTREWLKANPAIADEIERKIREAVGVKIEINENQGDEEFADDAFDA
CCCCHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCCC
>Mature Secondary Structure 
ASEDKSKALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRG
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCEEEEEECCEEEEEEECCCCCCCC
RVVEIYGPESSGKTTLCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQP
CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHHEECCC
DTGEQALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLT
CCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGGIKKGDEVIG
CCCEECCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCC
NDTRVKVVKNKVSPPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIG
CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCEECC
QGKDNTREWLKANPAIADEIERKIREAVGVKIEINENQGDEEFADDAFDA
CCCCHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782