| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is oraA
Identifier: 34497061
GI number: 34497061
Start: 1733317
End: 1733775
Strand: Reverse
Name: oraA
Synonym: CV_1606
Alternate gene names: 34497061
Gene position: 1733775-1733317 (Counterclockwise)
Preceding gene: 34497062
Following gene: 34497060
Centisome position: 36.49
GC content: 69.93
Gene sequence:
>459_bases ATGGCGGCGGAAGGCAAAAGCCTGAAGGCGCGGGCCGCCGAACTGCTGTCCCGCCGGGAATACACCCGGCAGGAACTGGT TCGGCGGCTCGCGCCTTTTGCCGACAGCGAGGACGAGCTCAACGCGGCGCTGGACGAGCTGGCCGCCTCGAACTGGCAGT CGGACGACCGCTTCGCCCGCCAGTTCGCCAGCAGCAAGGGAACAAAGTTCGGCAGCCGCCGCCTGGCGCAGGAAATGCGC CAGCGCGGCGTGGACAGCGACACCATACGCGAGGCGCTGTCCGGCCAGGACGACCTCGCCAGCGCGCGCGAGCAGTGGCG CAAGAAATTCGGCCGCCTGCCGGCCGACGCCGCGGAGAAAGCCAGGCAGTACCGTTTCCTGGCGCAGCGCGGCTTTCCGG CCGACGTGATCCGCCAGGTGCTGGCGGGCGGCGCGGACGACGACTTCTACGAGGACTGA
Upstream 100 bases:
>100_bases ACGAGATCGAGCGCAAGATCCGCGAAGCGGTGGGCGTGAAGATCGAAATCAACGAAAACCAGGGCGACGAAGAGTTCGCC GACGACGCCTTCGACGCCTG
Downstream 100 bases:
>100_bases GCCATGGCCACGCGCAGCATCGCCACCCAGATCGACATCGCCGCCAGCCCGGAGCGGGTGTGGCGGGTGCTGACAGACTG GCGGCGCTACCCGGAGTGGA
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MAAEGKSLKARAAELLSRREYTRQELVRRLAPFADSEDELNAALDELAASNWQSDDRFARQFASSKGTKFGSRRLAQEMR QRGVDSDTIREALSGQDDLASAREQWRKKFGRLPADAAEKARQYRFLAQRGFPADVIRQVLAGGADDDFYED
Sequences:
>Translated_152_residues MAAEGKSLKARAAELLSRREYTRQELVRRLAPFADSEDELNAALDELAASNWQSDDRFARQFASSKGTKFGSRRLAQEMR QRGVDSDTIREALSGQDDLASAREQWRKKFGRLPADAAEKARQYRFLAQRGFPADVIRQVLAGGADDDFYED >Mature_151_residues AAEGKSLKARAAELLSRREYTRQELVRRLAPFADSEDELNAALDELAASNWQSDDRFARQFASSKGTKFGSRRLAQEMRQ RGVDSDTIREALSGQDDLASAREQWRKKFGRLPADAAEKARQYRFLAQRGFPADVIRQVLAGGADDDFYED
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_CHRVO (Q7NXM0)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901276.1 - ProteinModelPortal: Q7NXM0 - SMR: Q7NXM0 - GeneID: 2551260 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1606 - NMPDR: fig|243365.1.peg.1606 - HOGENOM: HBG638240 - OMA: KIPRELM - ProtClustDB: CLSK2485404 - BioCyc: CVIO243365:CV_1606-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 17176; Mature: 17045
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEGKSLKARAAELLSRREYTRQELVRRLAPFADSEDELNAALDELAASNWQSDDRFAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH QFASSKGTKFGSRRLAQEMRQRGVDSDTIREALSGQDDLASAREQWRKKFGRLPADAAEK HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH ARQYRFLAQRGFPADVIRQVLAGGADDDFYED HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AAEGKSLKARAAELLSRREYTRQELVRRLAPFADSEDELNAALDELAASNWQSDDRFAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH QFASSKGTKFGSRRLAQEMRQRGVDSDTIREALSGQDDLASAREQWRKKFGRLPADAAEK HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH ARQYRFLAQRGFPADVIRQVLAGGADDDFYED HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782