| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496875
Identifier: 34496875
GI number: 34496875
Start: 1498001
End: 1498273
Strand: Reverse
Name: 34496875
Synonym: CV_1420
Alternate gene names: NA
Gene position: 1498273-1498001 (Counterclockwise)
Preceding gene: 34496876
Following gene: 34496874
Centisome position: 31.54
GC content: 61.54
Gene sequence:
>273_bases ATGAGCAGCTTAGACACCGCCTCGCTGTTGGACGCTCTGATCCAGCTCTGCCATCATATGCCCACGTACTGGACGCAGTT GACGGACTGGGCGGGCAATATGGACTGGGGACATCTGGTCTCGTCCGCGCTGCTGACCATCCTGGCCGTCAATGCCGTGA TGGTGCCCGCGGCGCTGGTCTGGCTGTCGCTGGACTTTTCCCTGCCCAAGCGGCTGATCCGCCGGGCCCGCTTCAAGCTG CCGTCCGTACACAAAGAGGTCAAGCATGGATAA
Upstream 100 bases:
>100_bases ACGCGTTTCATCCCACGCTTTCGGCAATCCGTCGCATGTCGATATCATCCCCTGAGGCGCTCTCCTACAGTCACATCACA AACCAAACAGGAGAAACGCC
Downstream 100 bases:
>100_bases TGAAAACCGCTCGGCGATGAGCCAGGACCACGTCGGCATGATTCTGAAAACCGTGGAAAAGTGCTGGTGGCGCTTCGTAG ACAAGGTGGCGCGGCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSSLDTASLLDALIQLCHHMPTYWTQLTDWAGNMDWGHLVSSALLTILAVNAVMVPAALVWLSLDFSLPKRLIRRARFKL PSVHKEVKHG
Sequences:
>Translated_90_residues MSSLDTASLLDALIQLCHHMPTYWTQLTDWAGNMDWGHLVSSALLTILAVNAVMVPAALVWLSLDFSLPKRLIRRARFKL PSVHKEVKHG >Mature_89_residues SSLDTASLLDALIQLCHHMPTYWTQLTDWAGNMDWGHLVSSALLTILAVNAVMVPAALVWLSLDFSLPKRLIRRARFKLP SVHKEVKHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10106; Mature: 9975
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLDTASLLDALIQLCHHMPTYWTQLTDWAGNMDWGHLVSSALLTILAVNAVMVPAALV CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WLSLDFSLPKRLIRRARFKLPSVHKEVKHG HHHHCHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure SSLDTASLLDALIQLCHHMPTYWTQLTDWAGNMDWGHLVSSALLTILAVNAVMVPAALV CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WLSLDFSLPKRLIRRARFKLPSVHKEVKHG HHHHCHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA