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The map label for this gene is ydiF [H]

Identifier: 34496876

GI number: 34496876

Start: 1498462

End: 1500174

Strand: Reverse

Name: ydiF [H]

Synonym: CV_1421

Alternate gene names: 34496876

Gene position: 1500174-1498462 (Counterclockwise)

Preceding gene: 34496877

Following gene: 34496875

Centisome position: 31.58

GC content: 71.22

Gene sequence:

>1713_bases
ATGACAACCCTGATTTCCGCATTGTCCGTACAACTGGACGCCGGCCGCGGCCCGCTGTTCCAGGACCTTTCCTTTACCGT
AAAACTGGGCGACCGCATCGGCCTGATCGGCCACAACGGCTGCGGCAAGAGCACGCTGCTGAAACTGCTGTCCGGCCAGC
TGGAGCCCAATAGCGGGGAAATTCAATACGCGTCCGCCTGCCGGCTGCAGCATGTCGAACAGCATCTGCCCGAACGCCTG
TACGCGTTATCCGCCCGCCAGGCGCTGCAGGAGACGGTGGAGGCGGACCAGCATTGGCGCGTCGACAGCCTGCTGGCCGA
ACTGGAGCTGGCGGCCCAGGCCGACACGCCGGTCTCCGGCCTCAGCGGCGGCCAGCACACCCGGCTGCTGCTGGGCCGCG
CGGTGCTGCGCCAGCCCAATCTGCTGCTGCTGGACGAACCCAGCAACCATCTGGACCTGCCGTCCCTGCTGTGGCTGGAG
GACTTCCTCACCCGCTGGCCAGGCGGCTACATCCTGGTATCGCACGACGCGCGGCTGCTGGACCGCGCCACCCGCCACAG
CTGGGTGATGCGCGACGCGCGGCTGTACCGTTTCGAGCTGCCGTGCAGCCAGGCGCTGGCAGAGCTGGCCGAGGCCGACC
AAGCCGCCCGCGCCCGCCGCGCCGGCGAGCAGAAGGAGATAGACCGGCTCGCCGCCAGCAGCAAGCGGCTGGCGATCTGG
GGCCGCGAGCACGACAACGAGAAGCTGGTGCGCAAGGCCAAGTCCATGGAGAAGCGCGTCGACAGGCTGAAGGACGAGCA
GACCTTCGTCAGCCGCGGCAGCCCATGGCGGCTCAGCCTGCAAGGCCAGGCGCTGTCGGCCGACAGCCTGCTGGCTTTCG
CGTCGCTGCCGGTGTCGGCCGCGCCCGGCCTGCCGCCGTTGTTCACCGCCGCCGGGCTGTGGCTGCGTCCCGGCGACCGG
GTGGCGCTGCTGGGCGCCAACGGCGCCGGCAAATCCTCGCTGCTGCGCCAGTGCTGGGCCGACCTTCAGGCAGGAGAGCC
GCGCGCCGGCTGGCGCTGGCATCCGGCGGCCAGCGTCGCCTATTACGACCAGTCGCTGCGGCAGCTGGCCGACGGGGCGA
CGCTGATCGACGCGCTCTATCCGCTGGCGCCGTTGCCGGAGGCCGCGCGCCGGCAGGCCTTGATCGCCGCCGGCTTCGCC
TATGCCCGGCACGAGCAGAAAGTGGGCTCGCTCAGCGGCGGCGAGCGCGCGCGCCTGCTGTTCCTGGCGCTGTCGCTGGC
CAGCCACCACCTGCTGTGGCTGGACGAACCGACCAACCACCTGGATCTGGACGGCAAGCGCGAGCTGGCCGAGGCGCTGG
CCGCCTTCCCCGGCGGCGCGCTGCTGGTCTCCCATGACCGCGAACTGATCGAGGCCGCCTGCAACCGCTTCTGGGCGCTG
AACGATGGCCTGCTGCAAGAATGGCCGGACGCGGACAGCGCCTACGCCGCGCTGTTCACCGCGCCCGCCTCCCCGCCTGA
GCGGACGGTCCCGGCATCCGGCGCGCCCGCGCCGGCGGAGCCGGGCGGCGAGGAGGCGCAATGGCAGCGGCTATGCGAGC
TGGAGGCGCTGCTGGCGGCCGACCTGGCGCGCAAGCCCAGACACCAGAAGCCGCAGCTGCAGCAGGCTTGGCGCAATGAA
ATGCGGGCGCTGGCGCGCGCGCTAGGCCTGTAA

Upstream 100 bases:

>100_bases
CACTCCCATCTTTCCAGAGTCCTTTCTCGACTCATCCCCGTTGTCGCCAGCGCTCCTGTTGACAGGGACCGTCACGTCCC
CAGCAAGCGAGAGCACAAGC

Downstream 100 bases:

>100_bases
ACCCCGCCCCGGAAGCCGCGCGGCGACGCTGGCTTCCGGGGCGTTTTCTTTTCTCCCAGCGAAACCGGCTGCATTTCATC
CTCGCCAAACGCGTTTCATC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MTTLISALSVQLDAGRGPLFQDLSFTVKLGDRIGLIGHNGCGKSTLLKLLSGQLEPNSGEIQYASACRLQHVEQHLPERL
YALSARQALQETVEADQHWRVDSLLAELELAAQADTPVSGLSGGQHTRLLLGRAVLRQPNLLLLDEPSNHLDLPSLLWLE
DFLTRWPGGYILVSHDARLLDRATRHSWVMRDARLYRFELPCSQALAELAEADQAARARRAGEQKEIDRLAASSKRLAIW
GREHDNEKLVRKAKSMEKRVDRLKDEQTFVSRGSPWRLSLQGQALSADSLLAFASLPVSAAPGLPPLFTAAGLWLRPGDR
VALLGANGAGKSSLLRQCWADLQAGEPRAGWRWHPAASVAYYDQSLRQLADGATLIDALYPLAPLPEAARRQALIAAGFA
YARHEQKVGSLSGGERARLLFLALSLASHHLLWLDEPTNHLDLDGKRELAEALAAFPGGALLVSHDRELIEAACNRFWAL
NDGLLQEWPDADSAYAALFTAPASPPERTVPASGAPAPAEPGGEEAQWQRLCELEALLAADLARKPRHQKPQLQQAWRNE
MRALARALGL

Sequences:

>Translated_570_residues
MTTLISALSVQLDAGRGPLFQDLSFTVKLGDRIGLIGHNGCGKSTLLKLLSGQLEPNSGEIQYASACRLQHVEQHLPERL
YALSARQALQETVEADQHWRVDSLLAELELAAQADTPVSGLSGGQHTRLLLGRAVLRQPNLLLLDEPSNHLDLPSLLWLE
DFLTRWPGGYILVSHDARLLDRATRHSWVMRDARLYRFELPCSQALAELAEADQAARARRAGEQKEIDRLAASSKRLAIW
GREHDNEKLVRKAKSMEKRVDRLKDEQTFVSRGSPWRLSLQGQALSADSLLAFASLPVSAAPGLPPLFTAAGLWLRPGDR
VALLGANGAGKSSLLRQCWADLQAGEPRAGWRWHPAASVAYYDQSLRQLADGATLIDALYPLAPLPEAARRQALIAAGFA
YARHEQKVGSLSGGERARLLFLALSLASHHLLWLDEPTNHLDLDGKRELAEALAAFPGGALLVSHDRELIEAACNRFWAL
NDGLLQEWPDADSAYAALFTAPASPPERTVPASGAPAPAEPGGEEAQWQRLCELEALLAADLARKPRHQKPQLQQAWRNE
MRALARALGL
>Mature_569_residues
TTLISALSVQLDAGRGPLFQDLSFTVKLGDRIGLIGHNGCGKSTLLKLLSGQLEPNSGEIQYASACRLQHVEQHLPERLY
ALSARQALQETVEADQHWRVDSLLAELELAAQADTPVSGLSGGQHTRLLLGRAVLRQPNLLLLDEPSNHLDLPSLLWLED
FLTRWPGGYILVSHDARLLDRATRHSWVMRDARLYRFELPCSQALAELAEADQAARARRAGEQKEIDRLAASSKRLAIWG
REHDNEKLVRKAKSMEKRVDRLKDEQTFVSRGSPWRLSLQGQALSADSLLAFASLPVSAAPGLPPLFTAAGLWLRPGDRV
ALLGANGAGKSSLLRQCWADLQAGEPRAGWRWHPAASVAYYDQSLRQLADGATLIDALYPLAPLPEAARRQALIAAGFAY
ARHEQKVGSLSGGERARLLFLALSLASHHLLWLDEPTNHLDLDGKRELAEALAAFPGGALLVSHDRELIEAACNRFWALN
DGLLQEWPDADSAYAALFTAPASPPERTVPASGAPAPAEPGGEEAQWQRLCELEALLAADLARKPRHQKPQLQQAWRNEM
RALARALGL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=29.5454545454545, Blast_Score=156, Evalue=6e-38,
Organism=Homo sapiens, GI27881506, Length=543, Percent_Identity=27.9926335174954, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI10947137, Length=543, Percent_Identity=27.9926335174954, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI10947135, Length=506, Percent_Identity=25.6916996047431, Blast_Score=139, Evalue=9e-33,
Organism=Homo sapiens, GI69354671, Length=506, Percent_Identity=25.6916996047431, Blast_Score=139, Evalue=1e-32,
Organism=Homo sapiens, GI27477115, Length=150, Percent_Identity=32, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI11967971, Length=157, Percent_Identity=35.6687898089172, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI6005701, Length=150, Percent_Identity=30.6666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI73747915, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789751, Length=530, Percent_Identity=31.1320754716981, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1787041, Length=520, Percent_Identity=29.0384615384615, Blast_Score=182, Evalue=6e-47,
Organism=Escherichia coli, GI1787182, Length=535, Percent_Identity=29.3457943925234, Blast_Score=166, Evalue=5e-42,
Organism=Escherichia coli, GI2367384, Length=504, Percent_Identity=28.968253968254, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=31.9371727748691, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87081791, Length=174, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789891, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=31.2796208530806, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081709, Length=152, Percent_Identity=30.9210526315789, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1787758, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI48994997, Length=202, Percent_Identity=32.6732673267327, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=199, Percent_Identity=28.1407035175879, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787370, Length=196, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=532, Percent_Identity=29.3233082706767, Blast_Score=166, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17559834, Length=506, Percent_Identity=26.4822134387352, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17555318, Length=512, Percent_Identity=26.7578125, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI71992290, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=175, Percent_Identity=30.2857142857143, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=198, Percent_Identity=25.2525252525253, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=538, Percent_Identity=28.2527881040892, Blast_Score=163, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=27.2373540856031, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=211, Percent_Identity=30.3317535545024, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6324314, Length=212, Percent_Identity=29.7169811320755, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6325030, Length=342, Percent_Identity=26.9005847953216, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24666836, Length=527, Percent_Identity=29.2220113851992, Blast_Score=182, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24642252, Length=524, Percent_Identity=30.1526717557252, Blast_Score=175, Evalue=1e-43,
Organism=Drosophila melanogaster, GI18859989, Length=524, Percent_Identity=30.1526717557252, Blast_Score=175, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24641342, Length=522, Percent_Identity=27.2030651340996, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI116007184, Length=136, Percent_Identity=31.6176470588235, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221500365, Length=136, Percent_Identity=31.6176470588235, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281363262, Length=160, Percent_Identity=29.375, Blast_Score=66, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24653245, Length=160, Percent_Identity=29.375, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62467; Mature: 62336

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLISALSVQLDAGRGPLFQDLSFTVKLGDRIGLIGHNGCGKSTLLKLLSGQLEPNSGE
CCHHHHHHHEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
IQYASACRLQHVEQHLPERLYALSARQALQETVEADQHWRVDSLLAELELAAQADTPVSG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
LSGGQHTRLLLGRAVLRQPNLLLLDEPSNHLDLPSLLWLEDFLTRWPGGYILVSHDARLL
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHH
DRATRHSWVMRDARLYRFELPCSQALAELAEADQAARARRAGEQKEIDRLAASSKRLAIW
HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE
GREHDNEKLVRKAKSMEKRVDRLKDEQTFVSRGSPWRLSLQGQALSADSLLAFASLPVSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCC
APGLPPLFTAAGLWLRPGDRVALLGANGAGKSSLLRQCWADLQAGEPRAGWRWHPAASVA
CCCCCHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCHHH
YYDQSLRQLADGATLIDALYPLAPLPEAARRQALIAAGFAYARHEQKVGSLSGGERARLL
HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FLALSLASHHLLWLDEPTNHLDLDGKRELAEALAAFPGGALLVSHDRELIEAACNRFWAL
HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHEEEC
NDGLLQEWPDADSAYAALFTAPASPPERTVPASGAPAPAEPGGEEAQWQRLCELEALLAA
CCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DLARKPRHQKPQLQQAWRNEMRALARALGL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTLISALSVQLDAGRGPLFQDLSFTVKLGDRIGLIGHNGCGKSTLLKLLSGQLEPNSGE
CHHHHHHHEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
IQYASACRLQHVEQHLPERLYALSARQALQETVEADQHWRVDSLLAELELAAQADTPVSG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
LSGGQHTRLLLGRAVLRQPNLLLLDEPSNHLDLPSLLWLEDFLTRWPGGYILVSHDARLL
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHH
DRATRHSWVMRDARLYRFELPCSQALAELAEADQAARARRAGEQKEIDRLAASSKRLAIW
HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE
GREHDNEKLVRKAKSMEKRVDRLKDEQTFVSRGSPWRLSLQGQALSADSLLAFASLPVSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCC
APGLPPLFTAAGLWLRPGDRVALLGANGAGKSSLLRQCWADLQAGEPRAGWRWHPAASVA
CCCCCHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCHHH
YYDQSLRQLADGATLIDALYPLAPLPEAARRQALIAAGFAYARHEQKVGSLSGGERARLL
HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FLALSLASHHLLWLDEPTNHLDLDGKRELAEALAAFPGGALLVSHDRELIEAACNRFWAL
HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHEEEC
NDGLLQEWPDADSAYAALFTAPASPPERTVPASGAPAPAEPGGEEAQWQRLCELEALLAA
CCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DLARKPRHQKPQLQQAWRNEMRALARALGL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]