Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yhdN [C]

Identifier: 34496845

GI number: 34496845

Start: 1466951

End: 1467289

Strand: Reverse

Name: yhdN [C]

Synonym: CV_1390

Alternate gene names: 34496845

Gene position: 1467289-1466951 (Counterclockwise)

Preceding gene: 34496846

Following gene: 34496834

Centisome position: 30.88

GC content: 69.62

Gene sequence:

>339_bases
ATGCAGAATCCACGCGACCTCGACGCGGCGATCGCCGCCGGCATTCGCGCCAGCGAACAAAGCGGCGAGCTGCAACGCGC
GAAGGGATGGGGCAAGCCGCTGGCGCTGGACGACGGCTATGCCGCCACGCCGGCGGAGCTGAGGATGTCATACAAGATAT
TGAAGGACGCCGGCTGCGTGCCGGCCGAGGTGGAAGCGATGCGGGAACTCGCCGCCCTGCGGGCGGAGCTTGCCGCGCTG
GAGCCGGATACCCCGGCCTGGCGCGCAAAACAGGCCCAGGTCCAGCAAAAAGGGCTGGACCTGGCCTTGCAGCTGGAGCG
GCTGCGCGGCGGCGCCTGA

Upstream 100 bases:

>100_bases
TGACGCTGCGCCTGGTCCGTTTCCTGGCCGAGCTCCCGCCACATCAATGATATTTATTGCAATGTCATAATTCAGCATTC
AATGCCCTGGGAGGCAAACC

Downstream 100 bases:

>100_bases
CGCCGCGCCGCTGGCCGGACTAAACGAACAAAAACCACAGCAGCAGGCCCAGGCCCGCCGCCACGGTACAGCCCGCCAGC
AGCTTCATCGGCGCGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCVPAEVEAMRELAALRAELAAL
EPDTPAWRAKQAQVQQKGLDLALQLERLRGGA

Sequences:

>Translated_112_residues
MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCVPAEVEAMRELAALRAELAAL
EPDTPAWRAKQAQVQQKGLDLALQLERLRGGA
>Mature_112_residues
MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCVPAEVEAMRELAALRAELAAL
EPDTPAWRAKQAQVQQKGLDLALQLERLRGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12024; Mature: 12024

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCV
CCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC
PAEVEAMRELAALRAELAALEPDTPAWRAKQAQVQQKGLDLALQLERLRGGA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCV
CCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC
PAEVEAMRELAALRAELAALEPDTPAWRAKQAQVQQKGLDLALQLERLRGGA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA