| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is yhdN [C]
Identifier: 34496845
GI number: 34496845
Start: 1466951
End: 1467289
Strand: Reverse
Name: yhdN [C]
Synonym: CV_1390
Alternate gene names: 34496845
Gene position: 1467289-1466951 (Counterclockwise)
Preceding gene: 34496846
Following gene: 34496834
Centisome position: 30.88
GC content: 69.62
Gene sequence:
>339_bases ATGCAGAATCCACGCGACCTCGACGCGGCGATCGCCGCCGGCATTCGCGCCAGCGAACAAAGCGGCGAGCTGCAACGCGC GAAGGGATGGGGCAAGCCGCTGGCGCTGGACGACGGCTATGCCGCCACGCCGGCGGAGCTGAGGATGTCATACAAGATAT TGAAGGACGCCGGCTGCGTGCCGGCCGAGGTGGAAGCGATGCGGGAACTCGCCGCCCTGCGGGCGGAGCTTGCCGCGCTG GAGCCGGATACCCCGGCCTGGCGCGCAAAACAGGCCCAGGTCCAGCAAAAAGGGCTGGACCTGGCCTTGCAGCTGGAGCG GCTGCGCGGCGGCGCCTGA
Upstream 100 bases:
>100_bases TGACGCTGCGCCTGGTCCGTTTCCTGGCCGAGCTCCCGCCACATCAATGATATTTATTGCAATGTCATAATTCAGCATTC AATGCCCTGGGAGGCAAACC
Downstream 100 bases:
>100_bases CGCCGCGCCGCTGGCCGGACTAAACGAACAAAAACCACAGCAGCAGGCCCAGGCCCGCCGCCACGGTACAGCCCGCCAGC AGCTTCATCGGCGCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCVPAEVEAMRELAALRAELAAL EPDTPAWRAKQAQVQQKGLDLALQLERLRGGA
Sequences:
>Translated_112_residues MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCVPAEVEAMRELAALRAELAAL EPDTPAWRAKQAQVQQKGLDLALQLERLRGGA >Mature_112_residues MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCVPAEVEAMRELAALRAELAAL EPDTPAWRAKQAQVQQKGLDLALQLERLRGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12024; Mature: 12024
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCV CCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC PAEVEAMRELAALRAELAALEPDTPAWRAKQAQVQQKGLDLALQLERLRGGA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MQNPRDLDAAIAAGIRASEQSGELQRAKGWGKPLALDDGYAATPAELRMSYKILKDAGCV CCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC PAEVEAMRELAALRAELAALEPDTPAWRAKQAQVQQKGLDLALQLERLRGGA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA