| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496834
Identifier: 34496834
GI number: 34496834
Start: 1454757
End: 1455830
Strand: Reverse
Name: 34496834
Synonym: CV_1379
Alternate gene names: NA
Gene position: 1455830-1454757 (Counterclockwise)
Preceding gene: 34496845
Following gene: 34496833
Centisome position: 30.64
GC content: 70.67
Gene sequence:
>1074_bases CTGGCGCGCCGGCTGGCGCGCGACTGCGGCCACGCCGTGCGGCTGTGGGTGGATGATCTGGCCAGCTTCGCCCGCATCGC GCCGGGACTGGACCCTGCGCTGCCGCAACAGACGCTGGCCGGCATCGACATCCGCCATTGGCCCCAGGCGGGCTTTCCCG CTGACGTCATCCCCGCCGACGCGGTGATCGAGGCCTTCGGCTGCCGGCTGCCGGACAGCTTCGAGGCGGCGATGGCGGCG CGGGCCGTCAAGCCGGCGTGGATCAACCTGGAATACCTGTCCGCCGAGGACTGGACCCTCAGCCATCACAAGCTGCCCTC GCCCCATCCCAGGCTGCCGCTGACCAAGCATTTCTTCTTTCCCGGCTTCAACGCCGCCAGCGGCGGGCTCATCTGCGAGG ACGGGCTGATAGACGCGCGCGCCGCCTGGCAAGCGGACGAAGCCGCGCAAAACGCCTACTGGCTGCGCCGCGGCCTGCCG CCGCGCAGCCCGGGCGAGCTGCGCGTCAGCCTGTTCGCCTACCACAACCCGGCCGCCGTACGGCTGGTGCAAGCCTGGGC CGACGGCCCGCTGCCGGTGCGCTGCCTGGTGCCGGAGGGCAAGGTGCTGCCCGATGTCGCCGGCCTGTTCAGCCGCGCGC TGCGCGCCGGCGACCATGTCCGGCTCGGCAACCTGGAGCTGCACATCCTGCCGATGAGCGATCAGGACGATTACGACCGC CTGCTATGGGGCTGCGATTTCAACTGCGTGCGCGGCGAAGACAGCCTGGTGCGCTCGCAATGGGCGGCGCGGCCCATGCT GTGGCACATCTACCCGCAGGAAGACGACGCCCACCTCGCCAAGCTGGAGGCCTTCCTCGATCAATACTGCGCCGGCCTGC CGGCCGAGATGGCGGCCGCGCTGCGCGCGCTGAGCCTGGCCTGGAACCGAGACGGCGACATCGCCGCCGCCTGGCGCGAC GCCGCGTGCTGGCTGCCGGCCTGGCGCGAACATGCGACAAACTGGCAACAGCGGCTGCTGAAAGACGGCGATCTGGCGGC CAGACTGCTGCACTTCATCGCCGAAATCAGCTAG
Upstream 100 bases:
>100_bases GCGTTCGTCCATTCATCCGTTTCGCCTCATGCCACCTCGCAGCTGGGATATCTTCTGTACCGTCATCGACAACTACGGCG ACATCGGCGTCGCCTGGCGC
Downstream 100 bases:
>100_bases AATACCGCGTTTTGTCGGGAATCTTTCCCGGCTTCAATTCAAGAGTTTGGGAATTAGACAAGCATGAAAACCGCACAAGA ACTGCGCGCAGGCAACGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MARRLARDCGHAVRLWVDDLASFARIAPGLDPALPQQTLAGIDIRHWPQAGFPADVIPADAVIEAFGCRLPDSFEAAMAA RAVKPAWINLEYLSAEDWTLSHHKLPSPHPRLPLTKHFFFPGFNAASGGLICEDGLIDARAAWQADEAAQNAYWLRRGLP PRSPGELRVSLFAYHNPAAVRLVQAWADGPLPVRCLVPEGKVLPDVAGLFSRALRAGDHVRLGNLELHILPMSDQDDYDR LLWGCDFNCVRGEDSLVRSQWAARPMLWHIYPQEDDAHLAKLEAFLDQYCAGLPAEMAAALRALSLAWNRDGDIAAAWRD AACWLPAWREHATNWQQRLLKDGDLAARLLHFIAEIS
Sequences:
>Translated_357_residues MARRLARDCGHAVRLWVDDLASFARIAPGLDPALPQQTLAGIDIRHWPQAGFPADVIPADAVIEAFGCRLPDSFEAAMAA RAVKPAWINLEYLSAEDWTLSHHKLPSPHPRLPLTKHFFFPGFNAASGGLICEDGLIDARAAWQADEAAQNAYWLRRGLP PRSPGELRVSLFAYHNPAAVRLVQAWADGPLPVRCLVPEGKVLPDVAGLFSRALRAGDHVRLGNLELHILPMSDQDDYDR LLWGCDFNCVRGEDSLVRSQWAARPMLWHIYPQEDDAHLAKLEAFLDQYCAGLPAEMAAALRALSLAWNRDGDIAAAWRD AACWLPAWREHATNWQQRLLKDGDLAARLLHFIAEIS >Mature_356_residues ARRLARDCGHAVRLWVDDLASFARIAPGLDPALPQQTLAGIDIRHWPQAGFPADVIPADAVIEAFGCRLPDSFEAAMAAR AVKPAWINLEYLSAEDWTLSHHKLPSPHPRLPLTKHFFFPGFNAASGGLICEDGLIDARAAWQADEAAQNAYWLRRGLPP RSPGELRVSLFAYHNPAAVRLVQAWADGPLPVRCLVPEGKVLPDVAGLFSRALRAGDHVRLGNLELHILPMSDQDDYDRL LWGCDFNCVRGEDSLVRSQWAARPMLWHIYPQEDDAHLAKLEAFLDQYCAGLPAEMAAALRALSLAWNRDGDIAAAWRDA ACWLPAWREHATNWQQRLLKDGDLAARLLHFIAEIS
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39695; Mature: 39563
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRLARDCGHAVRLWVDDLASFARIAPGLDPALPQQTLAGIDIRHWPQAGFPADVIPAD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH AVIEAFGCRLPDSFEAAMAARAVKPAWINLEYLSAEDWTLSHHKLPSPHPRLPLTKHFFF HHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEC PGFNAASGGLICEDGLIDARAAWQADEAAQNAYWLRRGLPPRSPGELRVSLFAYHNPAAV CCCCCCCCCEEECCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHH RLVQAWADGPLPVRCLVPEGKVLPDVAGLFSRALRAGDHVRLGNLELHILPMSDQDDYDR HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHH LLWGCDFNCVRGEDSLVRSQWAARPMLWHIYPQEDDAHLAKLEAFLDQYCAGLPAEMAAA HEECCCCEEECCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LRALSLAWNRDGDIAAAWRDAACWLPAWREHATNWQQRLLKDGDLAARLLHFIAEIS HHHHHHHCCCCCCEEEHHHCCHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure ARRLARDCGHAVRLWVDDLASFARIAPGLDPALPQQTLAGIDIRHWPQAGFPADVIPAD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH AVIEAFGCRLPDSFEAAMAARAVKPAWINLEYLSAEDWTLSHHKLPSPHPRLPLTKHFFF HHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEC PGFNAASGGLICEDGLIDARAAWQADEAAQNAYWLRRGLPPRSPGELRVSLFAYHNPAAV CCCCCCCCCEEECCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHH RLVQAWADGPLPVRCLVPEGKVLPDVAGLFSRALRAGDHVRLGNLELHILPMSDQDDYDR HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHH LLWGCDFNCVRGEDSLVRSQWAARPMLWHIYPQEDDAHLAKLEAFLDQYCAGLPAEMAAA HEECCCCEEECCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LRALSLAWNRDGDIAAAWRDAACWLPAWREHATNWQQRLLKDGDLAARLLHFIAEIS HHHHHHHCCCCCCEEEHHHCCHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA