| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is phoU [H]
Identifier: 34496716
GI number: 34496716
Start: 1325023
End: 1325727
Strand: Direct
Name: phoU [H]
Synonym: CV_1261
Alternate gene names: 34496716
Gene position: 1325023-1325727 (Clockwise)
Preceding gene: 34496715
Following gene: 34496717
Centisome position: 27.89
GC content: 63.69
Gene sequence:
>705_bases ATGGCAGAACACATTTCCAAGCAGTTCGACCTGGAGCTGGAAACCATCCGTACCCGCGTGCTGCAGATGGGCGGGCTGGT GGAGCAACAGATCCTGTCCGCCATCGACGCCCTGATGGCCGGCGACGTGCCGCGCCTGGACAAGGTGATGGCCGAGGACG CGCTGGTCAACGCGATGGAAGTCGGCATCGACGACGACTGCCTGCACATCATCGCCCGCCGCCAGCCGGCGGCCAGCGAC CTGCGCATCGTCTTCACCGTGATCAAGATCATCACCGACCTGGAGCGCATCGGCGACGAGGCGGCCAAGATCGCGCGCAT GGGCAAGACCATCCACCAGTCGGAGCGCTTCCAGATGCCGCGTTTCCGCGAGATCGAGAAGATGGCCGACGTGGCGCTGG CGATGCTGCGCCGCGCGCTGGACGCCTTCGCCCGGCTGGACACCAGCGCCGCGCTGGAGCTGGCCGAGGAGGATCAGCGC CTGGACGAGAATTTCGCGTCCGAGCTGCGCCAGCTGATCACCTTCATGATGGAAGACCCGCGCACCATCAGCATGTCCAT CGACACGCTGTTCATCTCCAAGGCGATAGAACGCATCGGCGACCACTCGAAGAACATCTCCGAATACGTGGTCTACCTGG TCAAGGGCAAGGACATCCGCCACACCACGCTGGAAGACATCAAGCGGGAAACCATGGGACGCTGA
Upstream 100 bases:
>100_bases CGGCCGCCGGGTGGCGGCCGGCTGCCGAAGATGGCATGTCACGGAGCTGTCATCTGACTGTCTTACAATTCCCCCTTTCC TGCTTGACCCGAGGCTAATC
Downstream 100 bases:
>100_bases GCGGCGCGGTCCGGACATGACGCTGAGTGCAAAATGGCGGTAACATCTCGCGGTTACCGCCATTTTGCTTGCCGGGCGCG CCGGGCGATGTTCGCCCCGA
Product: phosphate transport system regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAEHISKQFDLELETIRTRVLQMGGLVEQQILSAIDALMAGDVPRLDKVMAEDALVNAMEVGIDDDCLHIIARRQPAASD LRIVFTVIKIITDLERIGDEAAKIARMGKTIHQSERFQMPRFREIEKMADVALAMLRRALDAFARLDTSAALELAEEDQR LDENFASELRQLITFMMEDPRTISMSIDTLFISKAIERIGDHSKNISEYVVYLVKGKDIRHTTLEDIKRETMGR
Sequences:
>Translated_234_residues MAEHISKQFDLELETIRTRVLQMGGLVEQQILSAIDALMAGDVPRLDKVMAEDALVNAMEVGIDDDCLHIIARRQPAASD LRIVFTVIKIITDLERIGDEAAKIARMGKTIHQSERFQMPRFREIEKMADVALAMLRRALDAFARLDTSAALELAEEDQR LDENFASELRQLITFMMEDPRTISMSIDTLFISKAIERIGDHSKNISEYVVYLVKGKDIRHTTLEDIKRETMGR >Mature_233_residues AEHISKQFDLELETIRTRVLQMGGLVEQQILSAIDALMAGDVPRLDKVMAEDALVNAMEVGIDDDCLHIIARRQPAASDL RIVFTVIKIITDLERIGDEAAKIARMGKTIHQSERFQMPRFREIEKMADVALAMLRRALDAFARLDTSAALELAEEDQRL DENFASELRQLITFMMEDPRTISMSIDTLFISKAIERIGDHSKNISEYVVYLVKGKDIRHTTLEDIKRETMGR
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=234, Percent_Identity=43.5897435897436, Blast_Score=198, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26617; Mature: 26486
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHISKQFDLELETIRTRVLQMGGLVEQQILSAIDALMAGDVPRLDKVMAEDALVNAME CCCHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VGIDDDCLHIIARRQPAASDLRIVFTVIKIITDLERIGDEAAKIARMGKTIHQSERFQMP CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RFREIEKMADVALAMLRRALDAFARLDTSAALELAEEDQRLDENFASELRQLITFMMEDP HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RTISMSIDTLFISKAIERIGDHSKNISEYVVYLVKGKDIRHTTLEDIKRETMGR CEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AEHISKQFDLELETIRTRVLQMGGLVEQQILSAIDALMAGDVPRLDKVMAEDALVNAME CCHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VGIDDDCLHIIARRQPAASDLRIVFTVIKIITDLERIGDEAAKIARMGKTIHQSERFQMP CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RFREIEKMADVALAMLRRALDAFARLDTSAALELAEEDQRLDENFASELRQLITFMMEDP HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RTISMSIDTLFISKAIERIGDHSKNISEYVVYLVKGKDIRHTTLEDIKRETMGR CEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA