| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gloB [H]
Identifier: 34496709
GI number: 34496709
Start: 1320118
End: 1320900
Strand: Reverse
Name: gloB [H]
Synonym: CV_1254
Alternate gene names: 34496709
Gene position: 1320900-1320118 (Counterclockwise)
Preceding gene: 34496719
Following gene: 34496708
Centisome position: 27.8
GC content: 66.67
Gene sequence:
>783_bases ATGGGGGAAAGCCTTATGGCAGCCATGTTTAGCATCGCCCCGGTTGGGGCATTCACTGACAATTATATCTGGGTTTTGCG CGAGGGCGCGCGCGCCGTCGCCGTCGACCCGGGCGAAGCCGCGCCGCTGCTGCGCCATCTGGAGCAGGAACAGCTGCGGC TGGAAGCCGTTCTGATCACCCACCATCACGCCGACCACTGCGGCGGACTGGCGGATGTGCTGCGCGCCTGGCCGGGCATC CCGGTCTACGGCCCGGCCGGCCTTCCCGGCGTCAGCCATCCGGTGATGGAAGGCGATGCCGTCTCTCTGAGCATGGGACG GGCCGAAGTGCTGGAAGTGCCCGGCCATACGCTGGACCATCTTGCATACCTGCTGGAAGACGCGCTGTTTTGCGGGGACA CCCTGTTCGCGGCCGGCTGCGGCAGGCTATTCGAGGGGACGCCGGGACAGATGCTGGCCTCGCTGAAAAAGCTGGCCGGA TTGCCGCCCAACACCAAGGTTTACCCGGCCCACGAATACACGCTGTCGAATCTGCGCTTCGCGCTGGCTGCCGATCAGCA TAATCCGATACTCGCGATGCGCCACAGCCGCGACAGCGCGCTGCGGGATCGCGGACTGCCGACGCTGCCCAGCACCATCG CGCTGGAAACCGCCAGCAACCCCTTCTTGCGCAGCGGCGAGCCGGCGCTGCGCGAAGCGCTGCGGCGGCGCGGCGGGCAG CCCGGCGACAGCGAGGAAACCTGCTTCGCGCTGCTGAGGGAATGGAAGAACGATTTCCGTTGA
Upstream 100 bases:
>100_bases GAAGGCATCGGCCACCGCGCGCTCGAAATACGCCTGCTCGCGTTCAAGCAGGTAGCGTCCGAGCTCGGTGCCGGTCAGCC AGGCGCCAAACGAATTTTTC
Downstream 100 bases:
>100_bases AAGGCATGCCGGATACGTAAGTTTTCGCAGTCCGCCCGCCAGGCCCTTCACTTGCTCGTGAAATGAGCTATAAGCAATGA AAGCGCATGAAATGATTTGG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGESLMAAMFSIAPVGAFTDNYIWVLREGARAVAVDPGEAAPLLRHLEQEQLRLEAVLITHHHADHCGGLADVLRAWPGI PVYGPAGLPGVSHPVMEGDAVSLSMGRAEVLEVPGHTLDHLAYLLEDALFCGDTLFAAGCGRLFEGTPGQMLASLKKLAG LPPNTKVYPAHEYTLSNLRFALAADQHNPILAMRHSRDSALRDRGLPTLPSTIALETASNPFLRSGEPALREALRRRGGQ PGDSEETCFALLREWKNDFR
Sequences:
>Translated_260_residues MGESLMAAMFSIAPVGAFTDNYIWVLREGARAVAVDPGEAAPLLRHLEQEQLRLEAVLITHHHADHCGGLADVLRAWPGI PVYGPAGLPGVSHPVMEGDAVSLSMGRAEVLEVPGHTLDHLAYLLEDALFCGDTLFAAGCGRLFEGTPGQMLASLKKLAG LPPNTKVYPAHEYTLSNLRFALAADQHNPILAMRHSRDSALRDRGLPTLPSTIALETASNPFLRSGEPALREALRRRGGQ PGDSEETCFALLREWKNDFR >Mature_259_residues GESLMAAMFSIAPVGAFTDNYIWVLREGARAVAVDPGEAAPLLRHLEQEQLRLEAVLITHHHADHCGGLADVLRAWPGIP VYGPAGLPGVSHPVMEGDAVSLSMGRAEVLEVPGHTLDHLAYLLEDALFCGDTLFAAGCGRLFEGTPGQMLASLKKLAGL PPNTKVYPAHEYTLSNLRFALAADQHNPILAMRHSRDSALRDRGLPTLPSTIALETASNPFLRSGEPALREALRRRGGQP GDSEETCFALLREWKNDFR
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI116642887, Length=260, Percent_Identity=37.3076923076923, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI21703352, Length=257, Percent_Identity=37.7431906614786, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI94538320, Length=255, Percent_Identity=33.7254901960784, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI94538322, Length=255, Percent_Identity=33.7254901960784, Blast_Score=138, Evalue=5e-33, Organism=Homo sapiens, GI14150041, Length=233, Percent_Identity=37.7682403433476, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI46361987, Length=189, Percent_Identity=39.1534391534392, Blast_Score=111, Evalue=8e-25, Organism=Escherichia coli, GI1786406, Length=254, Percent_Identity=41.3385826771654, Blast_Score=174, Evalue=7e-45, Organism=Escherichia coli, GI1787158, Length=211, Percent_Identity=32.7014218009479, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536925, Length=259, Percent_Identity=34.3629343629344, Blast_Score=144, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6320478, Length=240, Percent_Identity=30.8333333333333, Blast_Score=99, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=238, Percent_Identity=29.8319327731092, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356335, Length=242, Percent_Identity=35.9504132231405, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI24667711, Length=242, Percent_Identity=35.9504132231405, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI24667703, Length=242, Percent_Identity=35.9504132231405, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI221330176, Length=185, Percent_Identity=30.8108108108108, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28141; Mature: 28010
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESLMAAMFSIAPVGAFTDNYIWVLREGARAVAVDPGEAAPLLRHLEQEQLRLEAVLIT CCHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEE HHHADHCGGLADVLRAWPGIPVYGPAGLPGVSHPVMEGDAVSLSMGRAEVLEVPGHTLDH CCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHEEECCCCHHHH LAYLLEDALFCGDTLFAAGCGRLFEGTPGQMLASLKKLAGLPPNTKVYPAHEYTLSNLRF HHHHHHHHHHHCHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHEEE ALAADQHNPILAMRHSRDSALRDRGLPTLPSTIALETASNPFLRSGEPALREALRRRGGQ EEEECCCCCEEEEECCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC PGDSEETCFALLREWKNDFR CCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GESLMAAMFSIAPVGAFTDNYIWVLREGARAVAVDPGEAAPLLRHLEQEQLRLEAVLIT CHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEE HHHADHCGGLADVLRAWPGIPVYGPAGLPGVSHPVMEGDAVSLSMGRAEVLEVPGHTLDH CCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHEEECCCCHHHH LAYLLEDALFCGDTLFAAGCGRLFEGTPGQMLASLKKLAGLPPNTKVYPAHEYTLSNLRF HHHHHHHHHHHCHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHEEE ALAADQHNPILAMRHSRDSALRDRGLPTLPSTIALETASNPFLRSGEPALREALRRRGGQ EEEECCCCCEEEEECCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC PGDSEETCFALLREWKNDFR CCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA