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The map label for this gene is yohF [C]

Identifier: 34496570

GI number: 34496570

Start: 1167435

End: 1168031

Strand: Reverse

Name: yohF [C]

Synonym: CV_1115

Alternate gene names: 34496570

Gene position: 1168031-1167435 (Counterclockwise)

Preceding gene: 34496575

Following gene: 34496569

Centisome position: 24.58

GC content: 70.02

Gene sequence:

>597_bases
ATGAAGATCCTGCTCGTAGGCGCCAGCGGCACGCTGGGCCGCGCCGTGCATCAAGCCTTGTCCCACCATCAAGTCATCAC
CGCCGGCCGCGGCAGCGGCGATCTGCGCGTCGACATCACCGACAGCGCCAGCGTGCAGCGGATGTTCGAGCAGGCAGGCC
GGCTCGACGCCATCGTCAGCGCCGCCGGCAGCGTGCACTTCGCCCCGCTGGCGGAGATGACCGCCGCCGATTTCCGCATC
GGCCTGAACGACAAGCTGCTGGGTCAGATCGACCTGGCGCTGACCGGCCAGCACTATCTGAACGACGGCGGCTCGATCAC
GCTGACCAGCGGCATCATCAGCGCCCAGCCCATCCGCCAGGGCGCCAACGCCACCGCGGTGAATCGCGCGCTGGAGGGCT
TCGCCGCCGCCGCCGCGCTGGAGCTGGGCCGCGACCGCCGCATCAACGTGGTCAGCCCCAACGCGCTGCAAGAATCGTGG
GACGGCTACGCGCCCTTCTTCCCCGGCTTCGAGCCGGTGCCGGCCTCGCGCGCGGCGCTGGCCTACGTGCGCAGCGTGGA
AGGCATCACCAACGGCCAGACGCTGACCGTCTGGTAA

Upstream 100 bases:

>100_bases
TAAAAACTCCAGATTATTAATCTTGTTCATCATAGCGGATTAATCAACACAGGGAATCCATGCACACTGTGGACATCGCA
ACCCGCAACGGAGAACACGC

Downstream 100 bases:

>100_bases
GCCCGGCTATACTGCAGCAAGCGTTGTCCGCCGCCCTTCTCGGACACGCTCCTGCCGCGGGAGCCGGATGATGAACAAGT
TGCTGGGCGGGCTGGCGTTG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; Short-Chain Dehydrogenase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Aklaviketone Reductase; Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; DTDP-4-Dehydrorhamnose Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKILLVGASGTLGRAVHQALSHHQVITAGRGSGDLRVDITDSASVQRMFEQAGRLDAIVSAAGSVHFAPLAEMTAADFRI
GLNDKLLGQIDLALTGQHYLNDGGSITLTSGIISAQPIRQGANATAVNRALEGFAAAAALELGRDRRINVVSPNALQESW
DGYAPFFPGFEPVPASRAALAYVRSVEGITNGQTLTVW

Sequences:

>Translated_198_residues
MKILLVGASGTLGRAVHQALSHHQVITAGRGSGDLRVDITDSASVQRMFEQAGRLDAIVSAAGSVHFAPLAEMTAADFRI
GLNDKLLGQIDLALTGQHYLNDGGSITLTSGIISAQPIRQGANATAVNRALEGFAAAAALELGRDRRINVVSPNALQESW
DGYAPFFPGFEPVPASRAALAYVRSVEGITNGQTLTVW
>Mature_198_residues
MKILLVGASGTLGRAVHQALSHHQVITAGRGSGDLRVDITDSASVQRMFEQAGRLDAIVSAAGSVHFAPLAEMTAADFRI
GLNDKLLGQIDLALTGQHYLNDGGSITLTSGIISAQPIRQGANATAVNRALEGFAAAAALELGRDRRINVVSPNALQESW
DGYAPFFPGFEPVPASRAALAYVRSVEGITNGQTLTVW

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 20762; Mature: 20762

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVGASGTLGRAVHQALSHHQVITAGRGSGDLRVDITDSASVQRMFEQAGRLDAIVS
CEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCHHHHHH
AAGSVHFAPLAEMTAADFRIGLNDKLLGQIDLALTGQHYLNDGGSITLTSGIISAQPIRQ
HCCCEEEHHHHHHHHHHEEECCCCCCEEEEEEEECCHHHCCCCCCEEEECCCCCCCHHHC
GANATAVNRALEGFAAAAALELGRDRRINVVSPNALQESWDGYAPFFPGFEPVPASRAAL
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHH
AYVRSVEGITNGQTLTVW
HHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MKILLVGASGTLGRAVHQALSHHQVITAGRGSGDLRVDITDSASVQRMFEQAGRLDAIVS
CEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCHHHHHH
AAGSVHFAPLAEMTAADFRIGLNDKLLGQIDLALTGQHYLNDGGSITLTSGIISAQPIRQ
HCCCEEEHHHHHHHHHHEEECCCCCCEEEEEEEECCHHHCCCCCCEEEECCCCCCCHHHC
GANATAVNRALEGFAAAAALELGRDRRINVVSPNALQESWDGYAPFFPGFEPVPASRAAL
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHH
AYVRSVEGITNGQTLTVW
HHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA