| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34496569
Identifier: 34496569
GI number: 34496569
Start: 1166654
End: 1167364
Strand: Reverse
Name: 34496569
Synonym: CV_1114
Alternate gene names: NA
Gene position: 1167364-1166654 (Counterclockwise)
Preceding gene: 34496570
Following gene: 34496566
Centisome position: 24.57
GC content: 67.79
Gene sequence:
>711_bases ATGAACAAGTTGCTGGGCGGGCTGGCGTTGCTGCTATGCCCGCTCCTTCTCCATGCCGAACCGATCCCGGCATACAGCCA GGCGATAGAGCCCTGGGGCGACGCCGTCAGCGGCGACGGCCTGACACCGCGCTTCCTGCGCTGGCTGGCGGAGCAAAGCG GCCTGCAGTTACAGCAGAACACCCGCCCGCTGCCGCGGCTGGTGGAGGAGCTGAAAGCGGGACGAGACGCATTGGCGCTG ATCACCGCGTCTCCGGAGCGCGACGTCTTCGCACTGGAACTATGCCGCCCGACCGACATCAGGCTGTCCATAGTCTACCG GCAAGACGAGCGCGCGCCGAAGGCCGCCAATCTGCGAGCGCGGCCGGTGGGCATTCTGCGCGGCACCCATACGCTAGATG GATTCATCGCCCAGAGCGGCGCGGAAGCGGTATTGGTCAACGACATGCGCCAGGGGCTGGGCATGCTGCGCATCGGCCGG CTGGATGCGATGATGTGCGTGCGCCCAGGCTGCGGCCGCGTGCTGCGCGGCCTGTCCGTGCCGGCCGACCGCTGGGCGGA ACTGCCGGTCAGCCGCGAGCCGATGGCGGTGTACGTGTCGCGCGCCCATCCGCTGGCGCATGACGCTGCGGCGTTGGAGA AAATCAAGGCCGCCTGCCAGTCCTCCGCCGGAAAGGCCAAGATGGCGGAGCTGCTGTCCATTTTCGACTGA
Upstream 100 bases:
>100_bases ACCAACGGCCAGACGCTGACCGTCTGGTAAGCCCGGCTATACTGCAGCAAGCGTTGTCCGCCGCCCTTCTCGGACACGCT CCTGCCGCGGGAGCCGGATG
Downstream 100 bases:
>100_bases CCATGAAAAACCCCGCCGGCCTTCGCAGGCGGACGGGGTCGTCGAACTCGCGGATCCAGCCGGATCAGATGTCGGCTTCC ACCTCGTTGCCCTTGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNKLLGGLALLLCPLLLHAEPIPAYSQAIEPWGDAVSGDGLTPRFLRWLAEQSGLQLQQNTRPLPRLVEELKAGRDALAL ITASPERDVFALELCRPTDIRLSIVYRQDERAPKAANLRARPVGILRGTHTLDGFIAQSGAEAVLVNDMRQGLGMLRIGR LDAMMCVRPGCGRVLRGLSVPADRWAELPVSREPMAVYVSRAHPLAHDAAALEKIKAACQSSAGKAKMAELLSIFD
Sequences:
>Translated_236_residues MNKLLGGLALLLCPLLLHAEPIPAYSQAIEPWGDAVSGDGLTPRFLRWLAEQSGLQLQQNTRPLPRLVEELKAGRDALAL ITASPERDVFALELCRPTDIRLSIVYRQDERAPKAANLRARPVGILRGTHTLDGFIAQSGAEAVLVNDMRQGLGMLRIGR LDAMMCVRPGCGRVLRGLSVPADRWAELPVSREPMAVYVSRAHPLAHDAAALEKIKAACQSSAGKAKMAELLSIFD >Mature_236_residues MNKLLGGLALLLCPLLLHAEPIPAYSQAIEPWGDAVSGDGLTPRFLRWLAEQSGLQLQQNTRPLPRLVEELKAGRDALAL ITASPERDVFALELCRPTDIRLSIVYRQDERAPKAANLRARPVGILRGTHTLDGFIAQSGAEAVLVNDMRQGLGMLRIGR LDAMMCVRPGCGRVLRGLSVPADRWAELPVSREPMAVYVSRAHPLAHDAAALEKIKAACQSSAGKAKMAELLSIFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25641; Mature: 25641
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLGGLALLLCPLLLHAEPIPAYSQAIEPWGDAVSGDGLTPRFLRWLAEQSGLQLQQN CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCC TRPLPRLVEELKAGRDALALITASPERDVFALELCRPTDIRLSIVYRQDERAPKAANLRA CCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC RPVGILRGTHTLDGFIAQSGAEAVLVNDMRQGLGMLRIGRLDAMMCVRPGCGRVLRGLSV CCEEEEECCHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCC PADRWAELPVSREPMAVYVSRAHPLAHDAAALEKIKAACQSSAGKAKMAELLSIFD CHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MNKLLGGLALLLCPLLLHAEPIPAYSQAIEPWGDAVSGDGLTPRFLRWLAEQSGLQLQQN CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCC TRPLPRLVEELKAGRDALALITASPERDVFALELCRPTDIRLSIVYRQDERAPKAANLRA CCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC RPVGILRGTHTLDGFIAQSGAEAVLVNDMRQGLGMLRIGRLDAMMCVRPGCGRVLRGLSV CCEEEEECCHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCC PADRWAELPVSREPMAVYVSRAHPLAHDAAALEKIKAACQSSAGKAKMAELLSIFD CHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA