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The map label for this gene is iscR [H]

Identifier: 34496550

GI number: 34496550

Start: 1140868

End: 1141362

Strand: Reverse

Name: iscR [H]

Synonym: CV_1095

Alternate gene names: 34496550

Gene position: 1141362-1140868 (Counterclockwise)

Preceding gene: 34496565

Following gene: 34496549

Centisome position: 24.02

GC content: 63.43

Gene sequence:

>495_bases
ATGCGCCTCACCACCAAAGGACGTTTTGCCGTCACCGCGATGCTGGATCTCGCGATGCGCGAGGAAGGCGGCCCGGTCAC
CCTGGCCGGCATCAGCGAACGCCAGAGCATCTCGCTGTCTTATCTCGAACAGTTGTTCGGCAAGCTAAGACGCGCCGAAC
TGGTGGACAGCGTGCGCGGTCCCGGCGGCGGCTACACGCTGGCCAAACAGATCTGCGACATCTCCGTCGCCGACATCATC
GTCGCCGTCGACGAGCCGGTGGACGCCACCCAATGCGGCGGCCGCGAGAACTGCCGCGGCAGCCAGCGCTGCATGACCCA
CGACTTGTGGACCAACCTCAACGTCACCATTTTCGATTACCTCTCCAAGGTAAGCCTCGCCAGCCTGGTGGAAGAACAAC
ACGCCAAAGAGCAGCAAGCCAAGGAGAGCAGCGTCGTGCAGGACAAGCGCGACAGCTGTAGCAGCTCCCGTGCAGCTGCC
AGCAGCGCCCTGTGA

Upstream 100 bases:

>100_bases
CGACTTCCGGCGCTGGATTGCCTCGCCAAATACTTGACTAATTTAGTCGGATATTGGGTATAATCTGAGGCAGTACCACC
ACCCACCGGAACTGAACACC

Downstream 100 bases:

>100_bases
GCGCACGAAAAATCTTGCGGAGATTAAATAAATGAGCCAGCCCAAGCTACCGATCTATCTGGATTACTCGGCCACCACCC
CGGTGGACCCGCGCGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRLTTKGRFAVTAMLDLAMREEGGPVTLAGISERQSISLSYLEQLFGKLRRAELVDSVRGPGGGYTLAKQICDISVADII
VAVDEPVDATQCGGRENCRGSQRCMTHDLWTNLNVTIFDYLSKVSLASLVEEQHAKEQQAKESSVVQDKRDSCSSSRAAA
SSAL

Sequences:

>Translated_164_residues
MRLTTKGRFAVTAMLDLAMREEGGPVTLAGISERQSISLSYLEQLFGKLRRAELVDSVRGPGGGYTLAKQICDISVADII
VAVDEPVDATQCGGRENCRGSQRCMTHDLWTNLNVTIFDYLSKVSLASLVEEQHAKEQQAKESSVVQDKRDSCSSSRAAA
SSAL
>Mature_164_residues
MRLTTKGRFAVTAMLDLAMREEGGPVTLAGISERQSISLSYLEQLFGKLRRAELVDSVRGPGGGYTLAKQICDISVADII
VAVDEPVDATQCGGRENCRGSQRCMTHDLWTNLNVTIFDYLSKVSLASLVEEQHAKEQQAKESSVVQDKRDSCSSSRAAA
SSAL

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=144, Percent_Identity=53.4722222222222, Blast_Score=148, Evalue=2e-37,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17770; Mature: 17770

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKGRFAVTAMLDLAMREEGGPVTLAGISERQSISLSYLEQLFGKLRRAELVDSVRG
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYTLAKQICDISVADIIVAVDEPVDATQCGGRENCRGSQRCMTHDLWTNLNVTIFDY
CCCCHHHHHHHHCCCHHHEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
LSKVSLASLVEEQHAKEQQAKESSVVQDKRDSCSSSRAAASSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLTTKGRFAVTAMLDLAMREEGGPVTLAGISERQSISLSYLEQLFGKLRRAELVDSVRG
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYTLAKQICDISVADIIVAVDEPVDATQCGGRENCRGSQRCMTHDLWTNLNVTIFDY
CCCCHHHHHHHHCCCHHHEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
LSKVSLASLVEEQHAKEQQAKESSVVQDKRDSCSSSRAAASSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]