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The map label for this gene is 34496130

Identifier: 34496130

GI number: 34496130

Start: 702743

End: 703129

Strand: Reverse

Name: 34496130

Synonym: CV_0675

Alternate gene names: NA

Gene position: 703129-702743 (Counterclockwise)

Preceding gene: 34496133

Following gene: 34496115

Centisome position: 14.8

GC content: 59.43

Gene sequence:

>387_bases
ATGGAAGATACGGATCGCCTTTACCGGCACTTGATTGACAAGGAAGCGGCGCTGCTAACGAAAGCCATACGCCGTGATGT
TGCCATGCTGGATCGCATGATCGCGGACGATTTCTTGGAATTTGGGGCCTCTGGCACCGCATTTGGGAAACGCGAGGTTC
TGCAACAACTTCCGGCGGCGGAAGATGGCCCGGCCATTCATGCCCAGGATTTTCAGGCGCGGCGGCTGGGAGAAGACGTG
GTGCAGATCACCTTCAAATCCGTCCGCGCCCCCGCTTCCAGCGCGCCGCGTTATACCCTGCGCAGCTCTATCTGGCGCCG
GCGCGACAACGCATGGCAAATGGTGTTTCACCAAGGCACCGTCACCGAGCCATTTGCGGTGGTGTGA

Upstream 100 bases:

>100_bases
ATAGCAGCGCGCAATCCGTCAAGCAACACAGAAGCTTGGCAATGCCATGTCATTGCGCTAGCGTGGCCTGTCAGCCACCT
CATCGCATGGGAAAGACGGA

Downstream 100 bases:

>100_bases
AGCGGTAGTGCGGCTTGGGCCATGCCCAGCGCCAAAAGCATCGCGGCTGAAGCCGCTTCTACAGGGTGAGGTGTAGGAGC
GGCTTCAGCCGCGAATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: RNAse H

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MEDTDRLYRHLIDKEAALLTKAIRRDVAMLDRMIADDFLEFGASGTAFGKREVLQQLPAAEDGPAIHAQDFQARRLGEDV
VQITFKSVRAPASSAPRYTLRSSIWRRRDNAWQMVFHQGTVTEPFAVV

Sequences:

>Translated_128_residues
MEDTDRLYRHLIDKEAALLTKAIRRDVAMLDRMIADDFLEFGASGTAFGKREVLQQLPAAEDGPAIHAQDFQARRLGEDV
VQITFKSVRAPASSAPRYTLRSSIWRRRDNAWQMVFHQGTVTEPFAVV
>Mature_128_residues
MEDTDRLYRHLIDKEAALLTKAIRRDVAMLDRMIADDFLEFGASGTAFGKREVLQQLPAAEDGPAIHAQDFQARRLGEDV
VQITFKSVRAPASSAPRYTLRSSIWRRRDNAWQMVFHQGTVTEPFAVV

Specific function: Unknown

COG id: COG4994

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14533; Mature: 14533

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDTDRLYRHLIDKEAALLTKAIRRDVAMLDRMIADDFLEFGASGTAFGKREVLQQLPAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
EDGPAIHAQDFQARRLGEDVVQITFKSVRAPASSAPRYTLRSSIWRRRDNAWQMVFHQGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC
VTEPFAVV
CCCCCCCC
>Mature Secondary Structure
MEDTDRLYRHLIDKEAALLTKAIRRDVAMLDRMIADDFLEFGASGTAFGKREVLQQLPAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
EDGPAIHAQDFQARRLGEDVVQITFKSVRAPASSAPRYTLRSSIWRRRDNAWQMVFHQGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC
VTEPFAVV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA