| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496115
Identifier: 34496115
GI number: 34496115
Start: 689026
End: 689775
Strand: Reverse
Name: 34496115
Synonym: CV_0660
Alternate gene names: NA
Gene position: 689775-689026 (Counterclockwise)
Preceding gene: 34496130
Following gene: 34496114
Centisome position: 14.52
GC content: 68.53
Gene sequence:
>750_bases ATGCTGCTAAATGAACAGCTTGCAAGCAGAAGCAAACCGCGCCTGGCCGTGCGCCTGGCCCAGTGCGCCGAGGATATCCG CCGCGCGCAGAAGCTGCGCTTCGAGGTTTTCGCCGGCGAAATGGGCGCCGAGCTGGCGTCCGCCGAGCTGGGCATAGACC GCGACGAATACGACGAGCTGTGCGACCACCTGATCGTCGAGGACCACAACACCGGCATGGTGGTGGGCACTTACCGCATG CTGTCCCCGGCAGCCGCCCGCCGCGCGCCCAGCCTGTACTCCGAGCACGAGTTCGACCTCTCCCGCCTGTCCCACCTGCG CGACAACCTGATCGAAGTGGGCCGCTCCTGCGTGCACCGCGACTTCCGCTCCGGCGCGGTGATCGCGCTGTTGTGGTCGG GCCTGGCCGACTACGTGCAGCAGCAGGGCGGCGCCTATCTCGCCGGCTGCGCCAGCGTGTCGCTGACCGACGGCGGCCAC CAGGCGGTCAGCCTGTACCGCCAGCTGGAAGGCCAGTACCTGTCGCCGGCGGAATGGCGCGTGTTCCCCCACCTGCCGCT GCCGTTGGACCGCGTGATAGACGATACCGCGCCGGTGCCGCTGCCGCCGCTGATCAAGGGCTATCTGCGCGCCGGCGCCC ACGTCTGCGGCGAGCCGGCCTGGGACCCGGATTTCAACTGCGCCGACTTCTTCATGCTGCTGCCGATGAGCCGGCTCAGC GCGCGCTACAACAAGCACTTCGTCGGCTGA
Upstream 100 bases:
>100_bases ATAGAAACGTCAAGCGCCCTTCACTGCATGGTCATGATACGGACATCGCGACGTCAAACAGCCCGCCTAGCATGTGCAGA ACCACAACGGGGGGCAAAAC
Downstream 100 bases:
>100_bases GGCCAGCCGGCTGCCGACGCCGGCCGGGATGCTACAATCCCGGCATGAACTACACCTTCGAGCCGATAGGCGTCATCCGT TCGCCGTATCGCGAGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLLNEQLASRSKPRLAVRLAQCAEDIRRAQKLRFEVFAGEMGAELASAELGIDRDEYDELCDHLIVEDHNTGMVVGTYRM LSPAAARRAPSLYSEHEFDLSRLSHLRDNLIEVGRSCVHRDFRSGAVIALLWSGLADYVQQQGGAYLAGCASVSLTDGGH QAVSLYRQLEGQYLSPAEWRVFPHLPLPLDRVIDDTAPVPLPPLIKGYLRAGAHVCGEPAWDPDFNCADFFMLLPMSRLS ARYNKHFVG
Sequences:
>Translated_249_residues MLLNEQLASRSKPRLAVRLAQCAEDIRRAQKLRFEVFAGEMGAELASAELGIDRDEYDELCDHLIVEDHNTGMVVGTYRM LSPAAARRAPSLYSEHEFDLSRLSHLRDNLIEVGRSCVHRDFRSGAVIALLWSGLADYVQQQGGAYLAGCASVSLTDGGH QAVSLYRQLEGQYLSPAEWRVFPHLPLPLDRVIDDTAPVPLPPLIKGYLRAGAHVCGEPAWDPDFNCADFFMLLPMSRLS ARYNKHFVG >Mature_249_residues MLLNEQLASRSKPRLAVRLAQCAEDIRRAQKLRFEVFAGEMGAELASAELGIDRDEYDELCDHLIVEDHNTGMVVGTYRM LSPAAARRAPSLYSEHEFDLSRLSHLRDNLIEVGRSCVHRDFRSGAVIALLWSGLADYVQQQGGAYLAGCASVSLTDGGH QAVSLYRQLEGQYLSPAEWRVFPHLPLPLDRVIDDTAPVPLPPLIKGYLRAGAHVCGEPAWDPDFNCADFFMLLPMSRLS ARYNKHFVG
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27723; Mature: 27723
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNEQLASRSKPRLAVRLAQCAEDIRRAQKLRFEVFAGEMGAELASAELGIDRDEYDEL CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH CDHLIVEDHNTGMVVGTYRMLSPAAARRAPSLYSEHEFDLSRLSHLRDNLIEVGRSCVHR HHHHEECCCCCCEEEEHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFRSGAVIALLWSGLADYVQQQGGAYLAGCASVSLTDGGHQAVSLYRQLEGQYLSPAEWR HHCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHCCCCCCCCCCE VFPHLPLPLDRVIDDTAPVPLPPLIKGYLRAGAHVCGEPAWDPDFNCADFFMLLPMSRLS ECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHH ARYNKHFVG HHHHHCCCC >Mature Secondary Structure MLLNEQLASRSKPRLAVRLAQCAEDIRRAQKLRFEVFAGEMGAELASAELGIDRDEYDEL CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH CDHLIVEDHNTGMVVGTYRMLSPAAARRAPSLYSEHEFDLSRLSHLRDNLIEVGRSCVHR HHHHEECCCCCCEEEEHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFRSGAVIALLWSGLADYVQQQGGAYLAGCASVSLTDGGHQAVSLYRQLEGQYLSPAEWR HHCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHCCCCCCCCCCE VFPHLPLPLDRVIDDTAPVPLPPLIKGYLRAGAHVCGEPAWDPDFNCADFFMLLPMSRLS ECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHH ARYNKHFVG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA