Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34496133

Identifier: 34496133

GI number: 34496133

Start: 705929

End: 706330

Strand: Reverse

Name: 34496133

Synonym: CV_0678

Alternate gene names: NA

Gene position: 706330-705929 (Counterclockwise)

Preceding gene: 34496134

Following gene: 34496130

Centisome position: 14.87

GC content: 47.51

Gene sequence:

>402_bases
TTGACCCGAATGGATGATTCTAGCTGGCCCAGACGGAACCCAAGCCCAGAAAAAGATTTCAGTCTTAATATTTTGGCTGT
TTCAGCAATAGAACGGGGAATTCCCGATCTTGCGACGCCACGAATAGCCCTCGAGCCAAGGCCGACGAACAGCCACTTCC
ATCCTTTCCTTTCGCATCCCCAAACCCAACAATCTCAAACGAAAAGAGACCCTTCCGGGCCTCTTTGTTTAGCGCTACTA
GCAACAAACTGGTCATGTCATCGCCATGACAGACTTTATTGCCTCGTTACAGACTTTATTCTTTCCGATCAACGAAAAGA
GGCCCTTCTGGGCCTCTTTGCTGAGTACTACTGGCAACAAGCCAATAATGTCATTGTCATTACAGACTTCATTACCTCGT
GA

Upstream 100 bases:

>100_bases
GCCAAGGCCTTCGCAGCAGAACTGTAGCGCGACAAGGCCCAAGCTCCCCGCTGCCGCGACAGCGGCATTGTGGGGCGTGA
TTGTAGGTGCCGACTAAATT

Downstream 100 bases:

>100_bases
CAGACTTTATTCTTTCCGATCACTAGTCAAACCAGTTGGCGTCCATCACTCCACAGTGACGCTCTTGGCCAGGTTCCGCG
GCTTGTCGACGTCGGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTRMDDSSWPRRNPSPEKDFSLNILAVSAIERGIPDLATPRIALEPRPTNSHFHPFLSHPQTQQSQTKRDPSGPLCLALL
ATNWSCHRHDRLYCLVTDFILSDQRKEALLGLFAEYYWQQANNVIVITDFITS

Sequences:

>Translated_133_residues
MTRMDDSSWPRRNPSPEKDFSLNILAVSAIERGIPDLATPRIALEPRPTNSHFHPFLSHPQTQQSQTKRDPSGPLCLALL
ATNWSCHRHDRLYCLVTDFILSDQRKEALLGLFAEYYWQQANNVIVITDFITS
>Mature_132_residues
TRMDDSSWPRRNPSPEKDFSLNILAVSAIERGIPDLATPRIALEPRPTNSHFHPFLSHPQTQQSQTKRDPSGPLCLALLA
TNWSCHRHDRLYCLVTDFILSDQRKEALLGLFAEYYWQQANNVIVITDFITS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15249; Mature: 15118

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMDDSSWPRRNPSPEKDFSLNILAVSAIERGIPDLATPRIALEPRPTNSHFHPFLSHP
CCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
QTQQSQTKRDPSGPLCLALLATNWSCHRHDRLYCLVTDFILSDQRKEALLGLFAEYYWQQ
CCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHHHC
ANNVIVITDFITS
CCCEEEEEEECCC
>Mature Secondary Structure 
TRMDDSSWPRRNPSPEKDFSLNILAVSAIERGIPDLATPRIALEPRPTNSHFHPFLSHP
CCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
QTQQSQTKRDPSGPLCLALLATNWSCHRHDRLYCLVTDFILSDQRKEALLGLFAEYYWQQ
CCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHHHC
ANNVIVITDFITS
CCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA