| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gpmA [H]
Identifier: 34495947
GI number: 34495947
Start: 520705
End: 521286
Strand: Reverse
Name: gpmA [H]
Synonym: CV_0492
Alternate gene names: 34495947
Gene position: 521286-520705 (Counterclockwise)
Preceding gene: 34495948
Following gene: 34495946
Centisome position: 10.97
GC content: 71.31
Gene sequence:
>582_bases CTGCTGCGCCACGGCGACATCGATCACGACGGCCGCCTGATCGGCCTGACCGACCTGCCGCTGACCGAGCTCGGACAGCA GCAGCTGGAACACAGCTGGAAACGCATCAGCAACCTGGCCCCGGTCACCTGCATCGCCACCTCGCCGCTGCAGCGCTGCC GGGAGTTCGCGGTCAAGCAGGCGCTGTCCGGCTCGCTGACGCTGAAGGTGGACCCGCGTTTCGCCGAGATGGACTTCGGC GGCTGGGACGGCCAGCCGGTGGCCGACCTGGAACAGGCCCACCCGGGCTGGGGCGACGCGCTGGCCGACGGCCGGCTCAG CCCCCCCGGCGGCGAAACCTTCGAGCAGTTCCGCACCCGCGCGCTGGCCGGCCTGGCCGACTGGATGACCGAGGCGCGCG GCAGCCACCGGCTGCTGGTGACGCACGGCGGCGTGATCACGGTGCTGATGGCCGAGCTGCTGGGCACCGAGTTCGCGGTG GCCAAGCTGATGACGGTGCAGCGCGGCGGCTTCGTCCAGCTGTCGATGTTGGAGGGCCATCCGGCCTATCTGCTGCGCCT GGAGTCGGCATGCGCGGACTGA
Upstream 100 bases:
>100_bases TGCCGCTGCTGCAGCTGGCGGTCAAGCTGCACAACGGCATGGCCACCTTCGACGAAGCCGGCGTCAGCGGCAAGTCGGCA TGAACCCCTATACCCTCACC
Downstream 100 bases:
>100_bases TACTGGCGGTGCAGTTCCTGACCCGGCTGCCGACGCCGCAGCTGGCCGATTTCAAACCCGAGTGGCTGGCGGCCAGCGCG CGCTGGTTTCCCGCCGTCGG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLRHGDIDHDGRLIGLTDLPLTELGQQQLEHSWKRISNLAPVTCIATSPLQRCREFAVKQALSGSLTLKVDPRFAEMDFG GWDGQPVADLEQAHPGWGDALADGRLSPPGGETFEQFRTRALAGLADWMTEARGSHRLLVTHGGVITVLMAELLGTEFAV AKLMTVQRGGFVQLSMLEGHPAYLLRLESACAD
Sequences:
>Translated_193_residues MLRHGDIDHDGRLIGLTDLPLTELGQQQLEHSWKRISNLAPVTCIATSPLQRCREFAVKQALSGSLTLKVDPRFAEMDFG GWDGQPVADLEQAHPGWGDALADGRLSPPGGETFEQFRTRALAGLADWMTEARGSHRLLVTHGGVITVLMAELLGTEFAV AKLMTVQRGGFVQLSMLEGHPAYLLRLESACAD >Mature_193_residues MLRHGDIDHDGRLIGLTDLPLTELGQQQLEHSWKRISNLAPVTCIATSPLQRCREFAVKQALSGSLTLKVDPRFAEMDFG GWDGQPVADLEQAHPGWGDALADGRLSPPGGETFEQFRTRALAGLADWMTEARGSHRLLVTHGGVITVLMAELLGTEFAV AKLMTVQRGGFVQLSMLEGHPAYLLRLESACAD
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=159, Percent_Identity=28.9308176100629, Blast_Score=60, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 21027; Mature: 21027
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHGDIDHDGRLIGLTDLPLTELGQQQLEHSWKRISNLAPVTCIATSPLQRCREFAVKQ CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH ALSGSLTLKVDPRFAEMDFGGWDGQPVADLEQAHPGWGDALADGRLSPPGGETFEQFRTR HHCCCEEEEECCCEEECCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHH ALAGLADWMTEARGSHRLLVTHGGVITVLMAELLGTEFAVAKLMTVQRGGFVQLSMLEGH HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCC PAYLLRLESACAD CHHEEEEHHHHCC >Mature Secondary Structure MLRHGDIDHDGRLIGLTDLPLTELGQQQLEHSWKRISNLAPVTCIATSPLQRCREFAVKQ CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH ALSGSLTLKVDPRFAEMDFGGWDGQPVADLEQAHPGWGDALADGRLSPPGGETFEQFRTR HHCCCEEEEECCCEEECCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHH ALAGLADWMTEARGSHRLLVTHGGVITVLMAELLGTEFAVAKLMTVQRGGFVQLSMLEGH HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCC PAYLLRLESACAD CHHEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA