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The map label for this gene is ynbB [H]

Identifier: 33864435

GI number: 33864435

Start: 2297488

End: 2298789

Strand: Reverse

Name: ynbB [H]

Synonym: PMT2171

Alternate gene names: 33864435

Gene position: 2298789-2297488 (Counterclockwise)

Preceding gene: 33864437

Following gene: 33864434

Centisome position: 95.35

GC content: 55.38

Gene sequence:

>1302_bases
TTGAAGACATTCCCTGCAGCTGGCTTTGATGAACTGCTGGTGCAGGCGTGGGCCAGGCGGCACGTCGGTTTTGTCTCTAA
GCGCCTTGAGGGGATCGCATGCGAGCGGACGGCTGCCGTGGCGGTTCGCCTTGCGAAGGTGTTGGAGGCTTTCAGCAGCG
AACGAGTCGCCACGCAACACTTTGCTTCCATCACCGGTTATGGCCATGGAGATCAGGCTCGGGAGGTGGTTGATCGTGTA
TTTGCAAGGGTGCTTGGTGCTGAGAAAGCAGCTGTTCGACTCCAGTTTGTGAGTGGTACCCATGCAATTGCGACTGCGTT
GTTTGGCGTTCTTCGGCCTGGTGACCGACTCGTGTCAGTGACCGGAGAGCCTTACGACACCCTTGAAGAAGTGATTGGTC
TGCGTGGATCCGGCCAGGGGTCTTTAATCGAATTAGGGATCTCTTATGACCAGCTGCCCCTCACGGCCGAGGGATGTGTG
GATGTTTCAGCCTTGGAACGCGCCTTGGAGGTGCCAACAAGGATGGTGTTGATACAGCGCAGCTGTGGCTACAGCTCGCG
GTCATCTCTTTCGATCAAAGCCATTGGCGATTTGTGTCATCGCATCCATAACTCTCAGCCTGGATGTGTCTGTTTTGTCG
ACAATTGCTATGGCGAGCTTGTTGAGGATTTGGAGCCCCCAGCAGTTGGTGCTGATCTGATTGCGGGCTCTTTGATCAAA
AATCTCGGTGGCACGATTGCTCCAACTGGTGGATATGTCGCCGGTCGGGCTGATTTGGTCGAGCAGGCTTGCTGTCGGCT
CACTGCTCCAGGAATTGGTAGTCAGGGGGGCACTGGCTTTGATCTTTATCGGTTGGTGTTGCAGGGGCTGTTCTTGGCTC
CACAAATGGTGGCAGAGGCATTGATCGGAGCTGATTTGGTCGCGGGTGTGTTCGACACTTTGGGCTTTGCAGTGAAGCCC
TCGATGGGAGCCTTTCGTAGCGATTTAATTCAGGCGGTGCAGCTTGGAGACCCTGAGGTTTTGAAAGTTGTTTGCAGGGC
CTTTCAGGCATGTTCACCTATTGGGGCCTATCTCGATCCTGTGCCGGCAGCGATGCCTGGGTATGCAAGCGATTTGGTGA
TGGCGGGCGGAACATTTATTGACGGCAGCACCAGTGAGTTTTCTGCAGATGCTCCCTTGCGCCCCCCTTACAACCTCTAT
GTGCAGGGAGGTACCCATCGCACTCATGTGGAATTGGCACTGATCCGAGCTTTGGTGGCTTTGGTTCGCGCCGGTTTGCT
GGATGTACCCCAGACTGGGTGA

Upstream 100 bases:

>100_bases
TGATTTTGGCAATGTTGTGCTCTTGATCTTCACTTTCGATTTCGTTTGACGTTCAACGAGGATTCAGCATGGGGATGATT
GATTCTGACCCCGGGTTGTT

Downstream 100 bases:

>100_bases
GCTTTGCCTCGCCAGGCTCGATGGCTTTCCAATTCCCCGACCACTTTCGGTTTGCCGATACCCATGAATACGCCAGTTTG
GATGGTGAATTGGTGCGGAT

Product: cystathionine beta-lyase family aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKTFPAAGFDELLVQAWARRHVGFVSKRLEGIACERTAAVAVRLAKVLEAFSSERVATQHFASITGYGHGDQAREVVDRV
FARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLVSVTGEPYDTLEEVIGLRGSGQGSLIELGISYDQLPLTAEGCV
DVSALERALEVPTRMVLIQRSCGYSSRSSLSIKAIGDLCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEALIGADLVAGVFDTLGFAVKP
SMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPIGAYLDPVPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLY
VQGGTHRTHVELALIRALVALVRAGLLDVPQTG

Sequences:

>Translated_433_residues
MKTFPAAGFDELLVQAWARRHVGFVSKRLEGIACERTAAVAVRLAKVLEAFSSERVATQHFASITGYGHGDQAREVVDRV
FARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLVSVTGEPYDTLEEVIGLRGSGQGSLIELGISYDQLPLTAEGCV
DVSALERALEVPTRMVLIQRSCGYSSRSSLSIKAIGDLCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEALIGADLVAGVFDTLGFAVKP
SMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPIGAYLDPVPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLY
VQGGTHRTHVELALIRALVALVRAGLLDVPQTG
>Mature_433_residues
MKTFPAAGFDELLVQAWARRHVGFVSKRLEGIACERTAAVAVRLAKVLEAFSSERVATQHFASITGYGHGDQAREVVDRV
FARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLVSVTGEPYDTLEEVIGLRGSGQGSLIELGISYDQLPLTAEGCV
DVSALERALEVPTRMVLIQRSCGYSSRSSLSIKAIGDLCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEALIGADLVAGVFDTLGFAVKP
SMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPIGAYLDPVPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLY
VQGGTHRTHVELALIRALVALVRAGLLDVPQTG

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45559; Mature: 45559

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFPAAGFDELLVQAWARRHVGFVSKRLEGIACERTAAVAVRLAKVLEAFSSERVATQH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FASITGYGHGDQAREVVDRVFARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLVSV
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEE
TGEPYDTLEEVIGLRGSGQGSLIELGISYDQLPLTAEGCVDVSALERALEVPTRMVLIQR
CCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHCCHHHHHEEC
SCGYSSRSSLSIKAIGDLCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHH
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEA
HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIGADLVAGVFDTLGFAVKPSMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPIGAYLDP
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCC
VPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLYVQGGTHRTHVELALIRALVA
CCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
LVRAGLLDVPQTG
HHHHCCCCCCCCC
>Mature Secondary Structure
MKTFPAAGFDELLVQAWARRHVGFVSKRLEGIACERTAAVAVRLAKVLEAFSSERVATQH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FASITGYGHGDQAREVVDRVFARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLVSV
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEE
TGEPYDTLEEVIGLRGSGQGSLIELGISYDQLPLTAEGCVDVSALERALEVPTRMVLIQR
CCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHCCHHHHHEEC
SCGYSSRSSLSIKAIGDLCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHH
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEA
HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIGADLVAGVFDTLGFAVKPSMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPIGAYLDP
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCC
VPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLYVQGGTHRTHVELALIRALVA
CCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
LVRAGLLDVPQTG
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]