| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864437
Identifier: 33864437
GI number: 33864437
Start: 2299981
End: 2300733
Strand: Reverse
Name: 33864437
Synonym: PMT2173
Alternate gene names: NA
Gene position: 2300733-2299981 (Counterclockwise)
Preceding gene: 33864445
Following gene: 33864435
Centisome position: 95.43
GC content: 54.45
Gene sequence:
>753_bases GTGACTAAGCCTGATGTTGAATCTGATTCGGCGACCAGGGGCTATCGCGAGCGCTTGGATGATGGGCGGCGGGCCATGGC TCATCTCATTCATGTCTGGCATGAGCGCAATGGTTGGTCACATAAGGTCTTGCCGGCTCTGGCTGAATGCCTTGATCTCG GCCGGGTGCACAATTCGCAGATCTCTAATCTGCGCAACGGCAAACTCGCTTCACCAGGCCCCGAAGTGTTTCTGGCATTG GGTCAAGCCAACGCCATCCTTCATGCCGGTCTAGAGCCGATTCGTGATCGCTTGGTTGAGGGTCATCCCGACTTACTCAA GGTGCTTTCGGAAAGTTCTCTTCCTCTGGAAGGAGCAGATGGTGAGCCACTCGGCGCTGGCGCTCTGTTTGAGATTTTTG TGGGTCTTGCTGCCTTACCTGCTGGCTTTGATTGGCGAATTGAAGAAGATGAGGCCGCAGCTCTTAGTGCTGCTTTGGCT GATTGTCTATGCAATGGAAAATCGTGGCGTCAATGCCGGGACAAGGTGATGGAGGCTTATCCAGTCACTAAGGCGCAGCG CAGAGAACGTTTTGCGGAGGTGATGGCTGGTTTGAGGGATTACAACTCTGAGGAGCTCGATGGCGAATTGCTTGATCTGC ACGCAACTCAGGTGGCCTTGGGTGGAGTGAACAGACAGGGAGCAGAGGGGTTTTTGGATGATCTCAGGGCCCGCTCAGAG TTGTTGGTTGATCAGGAAGCCCCGGAAACATAG
Upstream 100 bases:
>100_bases CTGCAGGCCTGCTTATCGTTGAAGGCGTAGGTATCACTCTGGAGGCCATGAGCGATCTATCGAATGTGCATAAACTATAC ACGATACGGATCCTTATCCA
Downstream 100 bases:
>100_bases CGGGCTTGCTGGACTCGACGAGCCAGGCCAAGACGACGCAACGCCTTCACGTGTTGCCAGGTGATGTCGAATTCAAACCA TCGCAGGCCATGACGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTKPDVESDSATRGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQISNLRNGKLASPGPEVFLAL GQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGADGEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALA DCLCNGKSWRQCRDKVMEAYPVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE LLVDQEAPET
Sequences:
>Translated_250_residues MTKPDVESDSATRGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQISNLRNGKLASPGPEVFLAL GQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGADGEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALA DCLCNGKSWRQCRDKVMEAYPVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE LLVDQEAPET >Mature_249_residues TKPDVESDSATRGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQISNLRNGKLASPGPEVFLALG QANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGADGEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALAD CLCNGKSWRQCRDKVMEAYPVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSEL LVDQEAPET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27363; Mature: 27232
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPDVESDSATRGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ISNLRNGKLASPGPEVFLALGQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGAD HHHCCCCCCCCCCHHHEEECCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC GEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALADCLCNGKSWRQCRDKVMEAY CCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC PVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE CCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LLVDQEAPET HHHCCCCCCC >Mature Secondary Structure TKPDVESDSATRGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ISNLRNGKLASPGPEVFLALGQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGAD HHHCCCCCCCCCCHHHEEECCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC GEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALADCLCNGKSWRQCRDKVMEAY CCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC PVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE CCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LLVDQEAPET HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA