| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864371
Identifier: 33864371
GI number: 33864371
Start: 2221164
End: 2221547
Strand: Direct
Name: 33864371
Synonym: PMT2107
Alternate gene names: NA
Gene position: 2221164-2221547 (Clockwise)
Preceding gene: 33864366
Following gene: 33864372
Centisome position: 92.13
GC content: 53.39
Gene sequence:
>384_bases ATGTTTGAAACCGTTCTCTTCCCGATTGATCAGAGCCGGGAAGCGATGGAAACAGCCAGCAAGGCTTTAGAACTGGCTAG AAGCCATAACAGCCGTTTGATCATCCTGTCTGTGGTCCAGGCTGAGCGGCCTGAAATGCATGATCCTGAGGCTGTAGCAG TTCTGTTGAAACGGGCTCGAGAGCAAGTCAAGCAGGCTGGGATTGCTTGTGAAGTGTTGGAGAGAGAAGGTAAGCCTGCG TTCGTGATCTGCGATGTGGCTGATGAATTAAATGTGGATGTGATCGTGATGGGCACACGCGGTGTCAATTTGGATGGCGA TAGCGAGAGCACAGCAGCCCGGGTGATCCAGTTGGCCCCTTGTCCGGTGCTGGTAGTGCCGTGA
Upstream 100 bases:
>100_bases ACATTAACCCGTGTTTTGTTTGGCTGGTTGGCTTGATGGGCCGGCGCACTGATCTGGTTGGCGCTAAGACAAGATTGAAG CAAGCATTTAGTTCAAACAC
Downstream 100 bases:
>100_bases GCACTCCAACAATTCAGTGGTATCCAGGCCACATCGCTAAAGCGGAACAACAACTCAGCAAGAATCTCGACAAAATTGAC CTTGTCATTGAGGTGCGGGA
Product: universal stress protein
Products: NA
Alternate protein names: USP Sll1654 [H]
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFETVLFPIDQSREAMETASKALELARSHNSRLIILSVVQAERPEMHDPEAVAVLLKRAREQVKQAGIACEVLEREGKPA FVICDVADELNVDVIVMGTRGVNLDGDSESTAARVIQLAPCPVLVVP
Sequences:
>Translated_127_residues MFETVLFPIDQSREAMETASKALELARSHNSRLIILSVVQAERPEMHDPEAVAVLLKRAREQVKQAGIACEVLEREGKPA FVICDVADELNVDVIVMGTRGVNLDGDSESTAARVIQLAPCPVLVVP >Mature_127_residues MFETVLFPIDQSREAMETASKALELARSHNSRLIILSVVQAERPEMHDPEAVAVLLKRAREQVKQAGIACEVLEREGKPA FVICDVADELNVDVIVMGTRGVNLDGDSESTAARVIQLAPCPVLVVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 13834; Mature: 13834
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETVLFPIDQSREAMETASKALELARSHNSRLIILSVVQAERPEMHDPEAVAVLLKRAR CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHH EQVKQAGIACEVLEREGKPAFVICDVADELNVDVIVMGTRGVNLDGDSESTAARVIQLAP HHHHHCCCCEEEHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHEEEECC CPVLVVP CCEEEEC >Mature Secondary Structure MFETVLFPIDQSREAMETASKALELARSHNSRLIILSVVQAERPEMHDPEAVAVLLKRAR CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHH EQVKQAGIACEVLEREGKPAFVICDVADELNVDVIVMGTRGVNLDGDSESTAARVIQLAP HHHHHCCCCEEEHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHEEEECC CPVLVVP CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]