| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864366
Identifier: 33864366
GI number: 33864366
Start: 2215919
End: 2216662
Strand: Direct
Name: 33864366
Synonym: PMT2102
Alternate gene names: NA
Gene position: 2215919-2216662 (Clockwise)
Preceding gene: 33864364
Following gene: 33864371
Centisome position: 91.91
GC content: 53.36
Gene sequence:
>744_bases GTGCCTCATCTCAAGCCAATCGCTTTGGCCTCCAGTCTGCTGGCATTGTGTTCAGCGTTGATGCCATTGATTGGCAGGGC TGCAGATGCTGTGCCTCTCAGTAGCCGATTGCAACAGGCTCTCAATACACCTGGAGGTGAAGCCCTCAGAGGTCTGCTCG CAGACGAATATGCATCTGATCTGGAAAATCGTTTTCGCATTTTCTCTGCCAAGTTTCCTGATGCCCGTTGGTCTGTTCGT CCTGCCGAACCTTTAAAGAATGGACAGCCGACCTTTGCAGTTGAAGTGCGTGGTCGTCGTGAAGCGGAAAGCCTTAGCTA TGCCCTTGAGGCCAACCAACGCTTGGCATTCCTCACTGAAGGCAAACTGATCACTGGTGAAGAAGTGATCAGCGAGCAAT CGATCCTGCGTAGCGCCAGCAAACCTTTGCCGATCAGCCTGTTGATTCCTGATGCTGTGCTCACAGGTAGTCGTTATGAC GTTGACGTGATCTTTGATCAGCCCTTGGGCCATGCGATGGTTGCCGGTGGCTTGATTGCTCTTACGCCTGCACAGGTGAG TCTCCAAAGCACTCCTGATATCCAGCTGGCACCGATGCATGGTGGTGGAATCTTTAAATCAGTGCAGGCCCCATTCACGC CCGGCAGCCAAACATGGGCAGCGATGTTGGTGCATCCTGATGGCGTGATCACAGTGACCAAGCGTGTGCGGGTGGTAAGC CATGAAGACGAACTGATCCCTTGA
Upstream 100 bases:
>100_bases TGGCCACCGGTGCCGCTTGCAGCAATCAGAAGCCTGGGCATGGCAATGGGCAGAGCATGAAGGTGCGGCCTAACTTATCG GCAGTGCCCTCAAGCCTCCA
Downstream 100 bases:
>100_bases GTTTTGTTTGGCGTAAATCTTCTTCATTGCCGTCAGCGGTAGAGATGGGATGTCTTGATTGGCGTGATCCAGTCATGATT GCCTAGGCGTGAAGATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPHLKPIALASSLLALCSALMPLIGRAADAVPLSSRLQQALNTPGGEALRGLLADEYASDLENRFRIFSAKFPDARWSVR PAEPLKNGQPTFAVEVRGRREAESLSYALEANQRLAFLTEGKLITGEEVISEQSILRSASKPLPISLLIPDAVLTGSRYD VDVIFDQPLGHAMVAGGLIALTPAQVSLQSTPDIQLAPMHGGGIFKSVQAPFTPGSQTWAAMLVHPDGVITVTKRVRVVS HEDELIP
Sequences:
>Translated_247_residues MPHLKPIALASSLLALCSALMPLIGRAADAVPLSSRLQQALNTPGGEALRGLLADEYASDLENRFRIFSAKFPDARWSVR PAEPLKNGQPTFAVEVRGRREAESLSYALEANQRLAFLTEGKLITGEEVISEQSILRSASKPLPISLLIPDAVLTGSRYD VDVIFDQPLGHAMVAGGLIALTPAQVSLQSTPDIQLAPMHGGGIFKSVQAPFTPGSQTWAAMLVHPDGVITVTKRVRVVS HEDELIP >Mature_246_residues PHLKPIALASSLLALCSALMPLIGRAADAVPLSSRLQQALNTPGGEALRGLLADEYASDLENRFRIFSAKFPDARWSVRP AEPLKNGQPTFAVEVRGRREAESLSYALEANQRLAFLTEGKLITGEEVISEQSILRSASKPLPISLLIPDAVLTGSRYDV DVIFDQPLGHAMVAGGLIALTPAQVSLQSTPDIQLAPMHGGGIFKSVQAPFTPGSQTWAAMLVHPDGVITVTKRVRVVSH EDELIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26487; Mature: 26356
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLKPIALASSLLALCSALMPLIGRAADAVPLSSRLQQALNTPGGEALRGLLADEYASD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH LENRFRIFSAKFPDARWSVRPAEPLKNGQPTFAVEVRGRREAESLSYALEANQRLAFLTE HHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEC GKLITGEEVISEQSILRSASKPLPISLLIPDAVLTGSRYDVDVIFDQPLGHAMVAGGLIA CCEECHHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCCCEEEEEECCCCCHHHHHCCEEE LTPAQVSLQSTPDIQLAPMHGGGIFKSVQAPFTPGSQTWAAMLVHPDGVITVTKRVRVVS ECCCEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEC HEDELIP CCCCCCC >Mature Secondary Structure PHLKPIALASSLLALCSALMPLIGRAADAVPLSSRLQQALNTPGGEALRGLLADEYASD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH LENRFRIFSAKFPDARWSVRPAEPLKNGQPTFAVEVRGRREAESLSYALEANQRLAFLTE HHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEC GKLITGEEVISEQSILRSASKPLPISLLIPDAVLTGSRYDVDVIFDQPLGHAMVAGGLIA CCEECHHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCCCEEEEEECCCCCHHHHHCCEEE LTPAQVSLQSTPDIQLAPMHGGGIFKSVQAPFTPGSQTWAAMLVHPDGVITVTKRVRVVS ECCCEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEC HEDELIP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA