| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864311
Identifier: 33864311
GI number: 33864311
Start: 2158465
End: 2159235
Strand: Direct
Name: 33864311
Synonym: PMT2046
Alternate gene names: NA
Gene position: 2158465-2159235 (Clockwise)
Preceding gene: 33864310
Following gene: 33864314
Centisome position: 89.53
GC content: 53.44
Gene sequence:
>771_bases GTGGCAACTACTCCTACCGGCTCCAGCCTTCAGGTGCTCAAAGCCGTCGAGGACGGCTGGAACGCCTTCTGTAAAGCTCC CTGGAGTTTTTTGCTTTTCCAAATCCTGGTGGGGGTGGTCACGCTCCCCTTCATCGGAATTGCTGCTCTTGGCGGTACTC GCATCGCCGCTGTCAAAGAAGTTGCATGGTTACATCCAGTCCTGGGTTATCTACTGCTGGTCGTTGGCCTGATCGGTTAC ATCATTGTGGTGCTATGGGGAATTGTGGGACTAATCCGAGGCGCTTGGACAGCACTCGATGGTCAAAAGCCTGACTTCGC CGTCTTTACACGTTGGGATCAAAGCTCCAGCTGGCGGCTACTGGGCTCATTGATTCTTTATATCGTCGTGATCGCTGTTG CCTCAGTGATTGCCTACCTGATAGGCCTGGGGCTAGGCCAGATCAATCAAGCCCTAATCGTGATTCCAAGCATTGCCCTA GCAATCTTTGCAATCTGGTTCCTGGTCACCCAACAGTTCCTCGTTCAAAACAGCCTGCTTGGCAGCAAGAACTCAGCCAA TGCATTGAGTTCTGGTATCGATGTGATCAACCCTTCCTGGTGGATCGTGCTCTGGCTGCTGATTGTGGAGGCTGTGATCC ATGCCATCGCCGCCACCTTCCACTATGGAGGTCTCTTCGTGATGGTTCCTGCCATGGTTTGCATCTCAACTGCGGCCTAC CGTCAGTTGTTCGGCAGCACAGACAACACTGGCCTGCTTAAGCCCAACTGA
Upstream 100 bases:
>100_bases AGATAGCAACAACTGCCTCACAATCGATGTCGCAGTTTCAAAAAATCCTGAGCAAAACTTTTACTGCAGCTAGTTTTTAA CAACATCTGTGTATTAGACG
Downstream 100 bases:
>100_bases GCAGCAAAAAGCCAGCGATGCCGAGTAGCGCCAAAACGAATTGGGCTACTCGGCTCACCAATAAGCCAGCGACCACTGCA AGCCCGACCAGCGCACCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MATTPTGSSLQVLKAVEDGWNAFCKAPWSFLLFQILVGVVTLPFIGIAALGGTRIAAVKEVAWLHPVLGYLLLVVGLIGY IIVVLWGIVGLIRGAWTALDGQKPDFAVFTRWDQSSSWRLLGSLILYIVVIAVASVIAYLIGLGLGQINQALIVIPSIAL AIFAIWFLVTQQFLVQNSLLGSKNSANALSSGIDVINPSWWIVLWLLIVEAVIHAIAATFHYGGLFVMVPAMVCISTAAY RQLFGSTDNTGLLKPN
Sequences:
>Translated_256_residues MATTPTGSSLQVLKAVEDGWNAFCKAPWSFLLFQILVGVVTLPFIGIAALGGTRIAAVKEVAWLHPVLGYLLLVVGLIGY IIVVLWGIVGLIRGAWTALDGQKPDFAVFTRWDQSSSWRLLGSLILYIVVIAVASVIAYLIGLGLGQINQALIVIPSIAL AIFAIWFLVTQQFLVQNSLLGSKNSANALSSGIDVINPSWWIVLWLLIVEAVIHAIAATFHYGGLFVMVPAMVCISTAAY RQLFGSTDNTGLLKPN >Mature_255_residues ATTPTGSSLQVLKAVEDGWNAFCKAPWSFLLFQILVGVVTLPFIGIAALGGTRIAAVKEVAWLHPVLGYLLLVVGLIGYI IVVLWGIVGLIRGAWTALDGQKPDFAVFTRWDQSSSWRLLGSLILYIVVIAVASVIAYLIGLGLGQINQALIVIPSIALA IFAIWFLVTQQFLVQNSLLGSKNSANALSSGIDVINPSWWIVLWLLIVEAVIHAIAATFHYGGLFVMVPAMVCISTAAYR QLFGSTDNTGLLKPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27533; Mature: 27402
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTPTGSSLQVLKAVEDGWNAFCKAPWSFLLFQILVGVVTLPFIGIAALGGTRIAAVKE CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VAWLHPVLGYLLLVVGLIGYIIVVLWGIVGLIRGAWTALDGQKPDFAVFTRWDQSSSWRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH LGSLILYIVVIAVASVIAYLIGLGLGQINQALIVIPSIALAIFAIWFLVTQQFLVQNSLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSKNSANALSSGIDVINPSWWIVLWLLIVEAVIHAIAATFHYGGLFVMVPAMVCISTAAY CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH RQLFGSTDNTGLLKPN HHHHCCCCCCCCCCCC >Mature Secondary Structure ATTPTGSSLQVLKAVEDGWNAFCKAPWSFLLFQILVGVVTLPFIGIAALGGTRIAAVKE CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VAWLHPVLGYLLLVVGLIGYIIVVLWGIVGLIRGAWTALDGQKPDFAVFTRWDQSSSWRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH LGSLILYIVVIAVASVIAYLIGLGLGQINQALIVIPSIALAIFAIWFLVTQQFLVQNSLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSKNSANALSSGIDVINPSWWIVLWLLIVEAVIHAIAATFHYGGLFVMVPAMVCISTAAY CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH RQLFGSTDNTGLLKPN HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA