| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is hisB [H]
Identifier: 33864146
GI number: 33864146
Start: 1985751
End: 1986380
Strand: Reverse
Name: hisB [H]
Synonym: PMT1880
Alternate gene names: 33864146
Gene position: 1986380-1985751 (Counterclockwise)
Preceding gene: 33864147
Following gene: 33864145
Centisome position: 82.39
GC content: 55.87
Gene sequence:
>630_bases ATGGGCATCATGACGTCGCTAAGACAGGGGGATGTTCATCGCGTCACCGCTGAAACCGACGTGCTTGTTCGTGTTGGGCT TGATGGCTGTGGTCAGTGCAACGTTTCTACGGGGGTCGCCTTCCTCGATCACATGCTTCACCAGCTTTCCAGCCATGGCC TGCTGGATTTAGAGATCACCGCGACTGGTGACACCCACATCGATGACCATCACACCAATGAGGATGTGGGTATTGCTGTT GGTCAGGCCCTATCTCAGGCACTTGGAGATCGACGTGGCATCCACCGCTTCGGTCATTTTGTGGCACCACTTGATGAGGC GTTGGTTCAGGTCGTTCTGGATTGCTCCGGTAGGCCTCATCTCAGTTATGGCCTGCAAATTCCCGCTGAGCGCATTGGTA GCTACGACAGCGAGTTGGTGAAGGAGTTCTTCGTGGCAGTTGTGAACAACAGCGGCCTGACCCTGCATATTCGCCAGTTG GCAGGCACCAATTCCCACCACATCGTTGAAGCCTGTTTCAAGGCCTTTGCCAGAGCTTTGCGCATGGCAATTGAAATCGA CCCGCGAAGGGCCGGTGCAGTACCTAGCAGCAAGGGTGTGCTGGAGCAGGCTGGCGGGCAGAAGAGCTGA
Upstream 100 bases:
>100_bases GAGCGATCTTTCCAGTGGTATCTCCGGTCAGACGCTTTATGTGGATGCTGGTTACTGCATTAACGGAATGTGATTTGACT GGCAGCATGACTTCATTTGG
Downstream 100 bases:
>100_bases ATGCTTGGGGAGTGGGGATTTCCTCGCTCGCGGCTGTAAGCCCTTTTGCGTAAGGATTAGTCAATCTTGATCAGCCTTGC AGTGAGCACAGTGAGCGATA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAV GQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHLSYGLQIPAERIGSYDSELVKEFFVAVVNNSGLTLHIRQL AGTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVLEQAGGQKS
Sequences:
>Translated_209_residues MGIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAV GQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHLSYGLQIPAERIGSYDSELVKEFFVAVVNNSGLTLHIRQL AGTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVLEQAGGQKS >Mature_208_residues GIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAVG QALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHLSYGLQIPAERIGSYDSELVKEFFVAVVNNSGLTLHIRQLA GTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVLEQAGGQKS
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=48.9690721649485, Blast_Score=184, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=168, Percent_Identity=47.6190476190476, Blast_Score=153, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 22431; Mature: 22300
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEIT CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE ATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPH ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC LSYGLQIPAERIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAFARAL CEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHH RMAIEIDPRRAGAVPSSKGVLEQAGGQKS HHHHEECCHHCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure GIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEIT CCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE ATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPH ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC LSYGLQIPAERIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAFARAL CEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHH RMAIEIDPRRAGAVPSSKGVLEQAGGQKS HHHHEECCHHCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA