| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is mviN [H]
Identifier: 33864118
GI number: 33864118
Start: 1957719
End: 1959326
Strand: Reverse
Name: mviN [H]
Synonym: PMT1851
Alternate gene names: 33864118
Gene position: 1959326-1957719 (Counterclockwise)
Preceding gene: 33864124
Following gene: 33864114
Centisome position: 81.27
GC content: 56.47
Gene sequence:
>1608_bases ATGGGGAGATCCTTAAAGCGTATTGCTCTGGTTGTCACAGTCGGCACCTTGCTAAGCAAGGTGGGAGGGCTGGTTCGTCA GCTTGTAATTGCGGCTGCCTTCGGGGTGGGAGCGGCTTATGACGCTTACAACTACGCCTACGTCTTGCCGGGGTTTCTGT TGATTCTCCTGGGTGGGATCAACGGTCCTTTCCACAGCGCCATGGTCAGTGTCCTCAGCAGACGGCCGCGGCAGGAAAGC GCTCATGTGTTGGCGGCGCTCAACACCATGGTTAGTGCTGCTTTGTTGTTGTTGACGGCTCTATTAGTGCTGGCAGCCAA TCCGTTGATCACTTTGGTGGGCCCAGGTCTGAGTCCTGAGCTGCATCGGATTGCTGTGGTTCAGCTTCAGGTGATGGCAC CAATGGCTTTGTTGGCAGGTTTGATCGGCCTGGGCTTCGGCTCCCTTAATGCTGCTGATGAGTTCTGGATTCCGGCGGTT TCGCCAATCATGTCCAGTCTTGCTTTGGTGGTCGGTGTCGGAGTTTTGTGGTGGCAGGTCGGCACGAACATCGGCTCCAT GCAGTTCGCCCTTAGGGGTGGCATTGTTTTGGCACTAGCCACCTTGGTGGGAGCCCTGTTGCAGTGGCTGATTCAACTGC CGGCGTTGATCAGGCAAGGCTTGACCAAGATGAAGTTGGTTTGGGATTGGCATCATCCAGGTGTGCGGGAGGTATGGCAG GTCATGGGCCCGGCCACCCTTTCTTCAGGCATGTTGCAGATCAATGTCTTTACAGATCTGTTTTTTGCTTCCGGCATTTT GGGTGCGGCAGCTGGTCTGGGCTACGCCAATCTTTTGGTACAGACGCCTTTGGGGCTGATCTCCAATGCATTGCTGGTGC CACTACTGCCAACATTTGCCAGGCTCACTGCCCAGGAAGATCGGCCTGCACTAGTCACTCGCATCCGTCAGGGGTTGATG TTGTCTACGGCCAGCATGGTTCCTCTGGGGGCCATGTTCGTGGCTCTTGGAACCCCAATCGTTGCTTTGGTGTACGAGCG AGGGGCCTTTGATGCCCAGGCGGCCAGCTTGGTGAGTGGATTGCTGATGGCCTATGGCGTGGGCATGCCTGCCTATCTAG CTCGTGATCTGCTGGTGCGTGTGTTTTATGCCCTAGGTGATGGCACTACCCCCTTCCGACTTTCTACGGCAGGGATTGGC TTGAATGTGGTGTTTGATTGGTTGTTGGTTGGTGGCCCAACCCCTTGGGGCCCTCAGTTGCCATTCAATTTCGGGGCTAC CGGTTTGGTGCTGGCGACGGTTGCAATCAATCTGCTGACCTGCGCAGCTCTCTTGGTGGGCTTGCATTCGCGACTAGGGG GCTTGCCTTTGCAACGGTGGGCTTTTGATGGCGTCAAGGTGCTTTGGGCTGGCCTGGCGGCAGGGTTTGCGGCTTGGGCT CTGGCGACCTTGATGCAATGGCCTCAGGACCTGCTGGGACTTTTGATTGAGGTGTGTCTGTCAGTGATCACCGGCCTTGC TGTATTCGCTCTCATCAGCATCTCTCTTGGTGTCGCTGAGGTGCGTGAGCTAGCGCGGGAGCTGCGTTACAGAGTTATTC CTCGCTGA
Upstream 100 bases:
>100_bases AGTGGACTCCCTAACAATCCTTCCGGGATGGCCTTGGTCATGGGGATGCTTGCAGGGCTTGAGAATGCTGCTAAATGATC AGATGGTCTGAGGCCCAAGG
Downstream 100 bases:
>100_bases GGCGAACTTCGCGATCCTCACGGACTTGAATTGGTAGCTCCAGATGGTCTCGGCCCACCAGCTGGGGTCCCTGTACCGAA ACGATGCGTGCTTCGATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MGRSLKRIALVVTVGTLLSKVGGLVRQLVIAAAFGVGAAYDAYNYAYVLPGFLLILLGGINGPFHSAMVSVLSRRPRQES AHVLAALNTMVSAALLLLTALLVLAANPLITLVGPGLSPELHRIAVVQLQVMAPMALLAGLIGLGFGSLNAADEFWIPAV SPIMSSLALVVGVGVLWWQVGTNIGSMQFALRGGIVLALATLVGALLQWLIQLPALIRQGLTKMKLVWDWHHPGVREVWQ VMGPATLSSGMLQINVFTDLFFASGILGAAAGLGYANLLVQTPLGLISNALLVPLLPTFARLTAQEDRPALVTRIRQGLM LSTASMVPLGAMFVALGTPIVALVYERGAFDAQAASLVSGLLMAYGVGMPAYLARDLLVRVFYALGDGTTPFRLSTAGIG LNVVFDWLLVGGPTPWGPQLPFNFGATGLVLATVAINLLTCAALLVGLHSRLGGLPLQRWAFDGVKVLWAGLAAGFAAWA LATLMQWPQDLLGLLIEVCLSVITGLAVFALISISLGVAEVRELARELRYRVIPR
Sequences:
>Translated_535_residues MGRSLKRIALVVTVGTLLSKVGGLVRQLVIAAAFGVGAAYDAYNYAYVLPGFLLILLGGINGPFHSAMVSVLSRRPRQES AHVLAALNTMVSAALLLLTALLVLAANPLITLVGPGLSPELHRIAVVQLQVMAPMALLAGLIGLGFGSLNAADEFWIPAV SPIMSSLALVVGVGVLWWQVGTNIGSMQFALRGGIVLALATLVGALLQWLIQLPALIRQGLTKMKLVWDWHHPGVREVWQ VMGPATLSSGMLQINVFTDLFFASGILGAAAGLGYANLLVQTPLGLISNALLVPLLPTFARLTAQEDRPALVTRIRQGLM LSTASMVPLGAMFVALGTPIVALVYERGAFDAQAASLVSGLLMAYGVGMPAYLARDLLVRVFYALGDGTTPFRLSTAGIG LNVVFDWLLVGGPTPWGPQLPFNFGATGLVLATVAINLLTCAALLVGLHSRLGGLPLQRWAFDGVKVLWAGLAAGFAAWA LATLMQWPQDLLGLLIEVCLSVITGLAVFALISISLGVAEVRELARELRYRVIPR >Mature_534_residues GRSLKRIALVVTVGTLLSKVGGLVRQLVIAAAFGVGAAYDAYNYAYVLPGFLLILLGGINGPFHSAMVSVLSRRPRQESA HVLAALNTMVSAALLLLTALLVLAANPLITLVGPGLSPELHRIAVVQLQVMAPMALLAGLIGLGFGSLNAADEFWIPAVS PIMSSLALVVGVGVLWWQVGTNIGSMQFALRGGIVLALATLVGALLQWLIQLPALIRQGLTKMKLVWDWHHPGVREVWQV MGPATLSSGMLQINVFTDLFFASGILGAAAGLGYANLLVQTPLGLISNALLVPLLPTFARLTAQEDRPALVTRIRQGLML STASMVPLGAMFVALGTPIVALVYERGAFDAQAASLVSGLLMAYGVGMPAYLARDLLVRVFYALGDGTTPFRLSTAGIGL NVVFDWLLVGGPTPWGPQLPFNFGATGLVLATVAINLLTCAALLVGLHSRLGGLPLQRWAFDGVKVLWAGLAAGFAAWAL ATLMQWPQDLLGLLIEVCLSVITGLAVFALISISLGVAEVRELARELRYRVIPR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=421, Percent_Identity=27.3159144893112, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56401; Mature: 56270
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSLKRIALVVTVGTLLSKVGGLVRQLVIAAAFGVGAAYDAYNYAYVLPGFLLILLGGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCC NGPFHSAMVSVLSRRPRQESAHVLAALNTMVSAALLLLTALLVLAANPLITLVGPGLSPE CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH LHRIAVVQLQVMAPMALLAGLIGLGFGSLNAADEFWIPAVSPIMSSLALVVGVGVLWWQV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH GTNIGSMQFALRGGIVLALATLVGALLQWLIQLPALIRQGLTKMKLVWDWHHPGVREVWQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCHHHHHH VMGPATLSSGMLQINVFTDLFFASGILGAAAGLGYANLLVQTPLGLISNALLVPLLPTFA HHCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHH RLTAQEDRPALVTRIRQGLMLSTASMVPLGAMFVALGTPIVALVYERGAFDAQAASLVSG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHH LLMAYGVGMPAYLARDLLVRVFYALGDGTTPFRLSTAGIGLNVVFDWLLVGGPTPWGPQL HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC PFNFGATGLVLATVAINLLTCAALLVGLHSRLGGLPLQRWAFDGVKVLWAGLAAGFAAWA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LATLMQWPQDLLGLLIEVCLSVITGLAVFALISISLGVAEVRELARELRYRVIPR HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRSLKRIALVVTVGTLLSKVGGLVRQLVIAAAFGVGAAYDAYNYAYVLPGFLLILLGGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCC NGPFHSAMVSVLSRRPRQESAHVLAALNTMVSAALLLLTALLVLAANPLITLVGPGLSPE CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH LHRIAVVQLQVMAPMALLAGLIGLGFGSLNAADEFWIPAVSPIMSSLALVVGVGVLWWQV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH GTNIGSMQFALRGGIVLALATLVGALLQWLIQLPALIRQGLTKMKLVWDWHHPGVREVWQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCHHHHHH VMGPATLSSGMLQINVFTDLFFASGILGAAAGLGYANLLVQTPLGLISNALLVPLLPTFA HHCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHH RLTAQEDRPALVTRIRQGLMLSTASMVPLGAMFVALGTPIVALVYERGAFDAQAASLVSG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHH LLMAYGVGMPAYLARDLLVRVFYALGDGTTPFRLSTAGIGLNVVFDWLLVGGPTPWGPQL HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC PFNFGATGLVLATVAINLLTCAALLVGLHSRLGGLPLQRWAFDGVKVLWAGLAAGFAAWA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LATLMQWPQDLLGLLIEVCLSVITGLAVFALISISLGVAEVRELARELRYRVIPR HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]