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The map label for this gene is 33863990

Identifier: 33863990

GI number: 33863990

Start: 1825463

End: 1826974

Strand: Direct

Name: 33863990

Synonym: PMT1723

Alternate gene names: NA

Gene position: 1825463-1826974 (Clockwise)

Preceding gene: 33863988

Following gene: 33863992

Centisome position: 75.72

GC content: 56.68

Gene sequence:

>1512_bases
ATGGCTGAGGACTCAATCATCGTGATCGGGGGCGGCATTGCCGGCCTAACGGCAACAGCCCTCTTAGCCAAGCAAGGATT
ACCCGTCACCTTGGTGGAAGCGCACCATCAACCTGGAGGGTGTGCCGGCACCTTCAGACGAGGTCCCTATATCTTCGATG
TGGGTGCCACCCAGGTTGCTGGCCTAGAACCCAGTGGCAGCCATGAACGCATCTATAGGCATCTGAACCTGCCCATGCCA
CAAGCGGAGCTACTCAACCCCGCTTGTGCAGTGGATCTCGCCGACGGATCCCAACCCATTCAGCTCTGGCATGATCCAAA
GCGCTGGGAACAAGAATGGCGATATCACTTCCCTGGCAGTGACTCCTTCTGGGCTCTGACTGCCAAGCTCCACCAAAGCA
ACTGGGGCTTTGCCAGCCATGATCCGGTCGTCACACCCCGCAACGCTTGGGACTTAGGCCAACTGCTTCAAGCTCTGCGT
CCAGCAACAATCACCTCAGGGCTATTGAGCAGCCTGACAGTGGCAGATCTCTTAAAGCTATGCGGCTGTGAGCAGGATCA
GCGCCTTCGCAAATTCTTAGACCTCCAGATCAAGCTCTATTCGCAAGAACCGCTCGATCGCACAGCCGCCCTCTATGGAG
CCACCGTGTTGCAAATGGCTCAAGCACCTCTTGGGCTCTGGCATCTGCAGGGATCGATGCAAAAACTCAGCGATGACCTA
ATGCATGCCCTGCAGCGGGATGGCGGCCAGGTATTGCTGCGCCATCGTGTGGTGGGCCTAGAACTAGCTACGCGGGGCAT
GGCTTGGACAGTCAGCATCAAAACCCCCAATGGCAAGGCTTTAGAACTGACCACACCAGATGTGGTATGCAGTCTGCCTC
CTCAATGCCTGAGATCGCTGATGCCACAAGGAACAGGCATGCCCAAGGCCTATCGCCAAAGGCTAATGAAATTACCTCAA
CCCAGTGGAGCTTTGGTGTTCTACGGAGCCATCGATCGCAGCGCCCTGCCTAAGAACTGTCCTGTCCATCTGCAAAGAGC
CTCCAAGACACCCGGCTCCCTGTTCGTATCAATCAGCCGTGAGGGAGATGGCCGTGCTCCCGCTGGTCAAGCCACAGTGA
TTGCAAGTGTGTTCACCGCCACAGCGGAGTGGTGGGGCCTAACTGAATCCACCTATCAAGAACGCAAGCAAACAGCCCTG
TTAGCCATCCGCCAAACACTTGAAAGTTGGTTAGATCTCGCACCTGAAGCTTGGCAGCATCAAGAACTAGCCACACCCAG
GAGCTTTGCACATTGGACTGGTCGGCCCAATGGAATTGTGGGTGGCCTTGGGCAGCACCCTTCACAATTTGGGCCCTTCG
GACTAGCAAGCCGCACTCCCATGCGAGGGCTCTGGCTCTGTGGCGACTCAATTCACCCTGGTGAAGGTACTGCAGGGGTG
AGCATCTCGGCACTCATGACCTGTCGCCAGCTCATGGCTCAGCGAGGTCATCAGTTGCGGGTGGCGAATTGA

Upstream 100 bases:

>100_bases
TTAATCACTTCACCACTCAAAGGTCCCTCGGCTGCTACCAAGCCCTGTCTCAGACGCTCGTTCATACCCACACCTCTCTA
AACCTTGCCAGCATGACCGG

Downstream 100 bases:

>100_bases
GGTCGTTGTTAGCAGCAACAAGAAAGCTGGGTCGCAATGCCTGGGAACGTTCCAATTCAGCCTTTAACTGCGACCAGTGC
CCATTCAAAACGGCCTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: C-3 4' Desaturase CrtD; FAD Dependent Oxidoreductase; Carotenoid Isomerase; Phytoene Dehydrogenase; Carotene Isomerase; Phytoene Dehydrogenase ; Phytoene Dehydrogenase-Related Protein; Lycopene Cyclase; Phytoene Dehydrogenase And Related Protein; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Like; Phytoene Dehydrogenase/Carotenoid Isomerase

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MAEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVAGLEPSGSHERIYRHLNLPMP
QAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGSDSFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALR
PATITSGLLSSLTVADLLKLCGCEQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
MHALQRDGGQVLLRHRVVGLELATRGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSLMPQGTGMPKAYRQRLMKLPQ
PSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISREGDGRAPAGQATVIASVFTATAEWWGLTESTYQERKQTAL
LAIRQTLESWLDLAPEAWQHQELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
SISALMTCRQLMAQRGHQLRVAN

Sequences:

>Translated_503_residues
MAEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVAGLEPSGSHERIYRHLNLPMP
QAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGSDSFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALR
PATITSGLLSSLTVADLLKLCGCEQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
MHALQRDGGQVLLRHRVVGLELATRGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSLMPQGTGMPKAYRQRLMKLPQ
PSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISREGDGRAPAGQATVIASVFTATAEWWGLTESTYQERKQTAL
LAIRQTLESWLDLAPEAWQHQELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
SISALMTCRQLMAQRGHQLRVAN
>Mature_502_residues
AEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVAGLEPSGSHERIYRHLNLPMPQ
AELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGSDSFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALRP
ATITSGLLSSLTVADLLKLCGCEQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDLM
HALQRDGGQVLLRHRVVGLELATRGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSLMPQGTGMPKAYRQRLMKLPQP
SGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISREGDGRAPAGQATVIASVFTATAEWWGLTESTYQERKQTALL
AIRQTLESWLDLAPEAWQHQELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGVS
ISALMTCRQLMAQRGHQLRVAN

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54806; Mature: 54674

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVA
CCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE
GLEPSGSHERIYRHLNLPMPQAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGS
CCCCCCCHHHHHHHHCCCCCHHHHCCCHHEEEECCCCCCEEECCCHHHHHHHCEEECCCC
DSFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALRPATITSGLLSSLTVADLLKL
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CGCEQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
HCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
MHALQRDGGQVLLRHRVVGLELATRGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSL
HHHHHCCCCCEEEHHHHHHHEEECCCEEEEEEEECCCCCEEEEECCCCEECCCHHHHHHH
MPQGTGMPKAYRQRLMKLPQPSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISR
CCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEHEECCCCCCEEEEEEEC
EGDGRAPAGQATVIASVFTATAEWWGLTESTYQERKQTALLAIRQTLESWLDLAPEAWQH
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
SISALMTCRQLMAQRGHQLRVAN
HHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
AEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVA
CCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE
GLEPSGSHERIYRHLNLPMPQAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGS
CCCCCCCHHHHHHHHCCCCCHHHHCCCHHEEEECCCCCCEEECCCHHHHHHHCEEECCCC
DSFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALRPATITSGLLSSLTVADLLKL
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CGCEQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
HCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
MHALQRDGGQVLLRHRVVGLELATRGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSL
HHHHHCCCCCEEEHHHHHHHEEECCCEEEEEEEECCCCCEEEEECCCCEECCCHHHHHHH
MPQGTGMPKAYRQRLMKLPQPSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISR
CCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEHEECCCCCCEEEEEEEC
EGDGRAPAGQATVIASVFTATAEWWGLTESTYQERKQTALLAIRQTLESWLDLAPEAWQH
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
SISALMTCRQLMAQRGHQLRVAN
HHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA