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The map label for this gene is 33863992

Identifier: 33863992

GI number: 33863992

Start: 1827937

End: 1829382

Strand: Direct

Name: 33863992

Synonym: PMT1725

Alternate gene names: NA

Gene position: 1827937-1829382 (Clockwise)

Preceding gene: 33863990

Following gene: 33863993

Centisome position: 75.82

GC content: 56.15

Gene sequence:

>1446_bases
ATGCTCGAAGCCCGCAGCCATCAGCAACTCAAGCACCTGCTCCTGCAGAACTCCTCGCCCTGGCCTCATCACCTCACTTT
GAGCCGTCTTGTTGCCCGCAGTCTCAGGCGCAAAGATCACACCCTGATCCAGCTCGACCCTCGTAGCAAAGACCTCTGGT
GGCTTGGTCTGCTGGTTCCTCTCTGCCTGGAGGCCAAGGATGCTGTGATGATCCTTTCCGATCAGCAGCGACGGCGACTC
CTCAAGGTAGAACTGCCACAACTGCTGACGAAAGGCATCAAACTCCCCTGCTGGGAAGGGCACCTTCCGCCCTCAGGGAA
TCAACTGTGGTTGATGAACCACAGTGAGTTGATTGAGGCACACCACCAGGGGCATCTCAAATCAAGGCAGTTGATCATTC
CAGAAGCAGACCAACTAAGCCAGCGACTAAGGGACAGCATGGCTTTGTCGATCACACCTCAAGACTGGGAGCGTTTGCGG
CGGGCACATCCTTCTGCGGAGGCTTCCCTCATGCAACTGCACGAACGATTAAGCCGCAGCCTGTTTACTCACGCCACCCG
AGCCAATGCCCAGGTTCGCCTTGATGGCAGCGAAATTCAGGCTCTCAAAGATCTCATGCGACTTCTAGGCCCCTCACCTT
CCCCTTGGCCTGCAGTGCTGAAGGCCGATAGCCGTTTTTGGGCAAGCTGGGCCGAACTCGATCACCGACTACTGCAATGG
CAATGGCATCTACAACCGCTCGAACCCCTTCAAAATCTTCCAGGTCTGTTACGAGACCAACCGTCTGTCCTGCTGAGCGG
ATCACGGGAGCACGAACTGGTCCGCACTGAGTTGGACGCTGCAGCATTTCCTGCCACCGTCATAGCCAGATTGAATGAAC
CCAACCTGCAGGAACCAATACCTCTTTTTGCACCGCGCCGCCAACCACTACCGAATACCGAAATCTATGCAGAGCATCTG
CTCGATCAATGCCGCCGTCTGATCCTGGGGCGTCCGGGCATCACTGTGGTGTTACTTGACGATCAGCAACTGCGCCGCCA
ACTCACAAGTGAGTTGGCGGCGGAATTTGGACGCAGAGTCGTTCATGAAACCACCGCTCCCGAATCCAACGGTGTTGTCT
GTTGCCGCTGGGCTTGGTGGCTTCATCACCAGGATCAACTCCCTCTCCCAGAACAACTAATCGTGGCCTTGCTTCCCCTG
GCGAGCGTAGAGTCACCACTCACAGCAGCAAGAGTAGAATCCCTCAAGAATCAAGGTCTTGACTGGTTCCGAGACCTTCT
CTTGCCTGAAGCTCTCAGCCTGCTTACACCAGCCATAGCTCCGCTCCGAAAAAATCACGGACGACTAGCAATCCTGGACG
GACGTCTACGAGGACGGAGCTGGGGGAAGCAAGTGCTGAGCACACTCGAGCCCTGGACACCCCTGCAACGCCTATTACCG
GATTAA

Upstream 100 bases:

>100_bases
TTTGTTCTGCTCCATCCCTACGGTTCTCGCACTGCAGTCCATGTTGATCGACCAATCAACATGGAGCTTTCTCGGGTTTA
CAGCTTCCTAGGCTCTGGCA

Downstream 100 bases:

>100_bases
GCCAACTACTCTTTAACAACCAAACAGCAACGAGGAAGGCCATGGGAGAAGCCAGACGACGATCCGAACAGGGCCTAGCA
CCACGCCAGAAACAATCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVPLCLEAKDAVMILSDQQRRRL
LKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEAHHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLR
RAHPSAEASLMQLHERLSRSLFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPAVLKADSRFWASWAELDHRLLQW
QWHLQPLEPLQNLPGLLRDQPSVLLSGSREHELVRTELDAAAFPATVIARLNEPNLQEPIPLFAPRRQPLPNTEIYAEHL
LDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRVVHETTAPESNGVVCCRWAWWLHHQDQLPLPEQLIVALLPL
ASVESPLTAARVESLKNQGLDWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP
D

Sequences:

>Translated_481_residues
MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVPLCLEAKDAVMILSDQQRRRL
LKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEAHHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLR
RAHPSAEASLMQLHERLSRSLFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPAVLKADSRFWASWAELDHRLLQW
QWHLQPLEPLQNLPGLLRDQPSVLLSGSREHELVRTELDAAAFPATVIARLNEPNLQEPIPLFAPRRQPLPNTEIYAEHL
LDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRVVHETTAPESNGVVCCRWAWWLHHQDQLPLPEQLIVALLPL
ASVESPLTAARVESLKNQGLDWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP
D
>Mature_481_residues
MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVPLCLEAKDAVMILSDQQRRRL
LKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEAHHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLR
RAHPSAEASLMQLHERLSRSLFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPAVLKADSRFWASWAELDHRLLQW
QWHLQPLEPLQNLPGLLRDQPSVLLSGSREHELVRTELDAAAFPATVIARLNEPNLQEPIPLFAPRRQPLPNTEIYAEHL
LDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRVVHETTAPESNGVVCCRWAWWLHHQDQLPLPEQLIVALLPL
ASVESPLTAARVESLKNQGLDWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP
D

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55096; Mature: 55096

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVP
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
LCLEAKDAVMILSDQQRRRLLKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEA
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHH
HHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLRRAHPSAEASLMQLHERLSRS
HHHCCCCCCEEECCCHHHHHHHHHHHHEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPAVLKADSRFWASWAELDHRLLQW
HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHEECCCHHHHHHHHHHHHHHHH
QWHLQPLEPLQNLPGLLRDQPSVLLSGSREHELVRTELDAAAFPATVIARLNEPNLQEPI
HCCCCCHHHHHCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PLFAPRRQPLPNTEIYAEHLLDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
VHETTAPESNGVVCCRWAWWLHHQDQLPLPEQLIVALLPLASVESPLTAARVESLKNQGL
HHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
DWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCC
D
C
>Mature Secondary Structure
MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVP
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
LCLEAKDAVMILSDQQRRRLLKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEA
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHH
HHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLRRAHPSAEASLMQLHERLSRS
HHHCCCCCCEEECCCHHHHHHHHHHHHEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPAVLKADSRFWASWAELDHRLLQW
HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHEECCCHHHHHHHHHHHHHHHH
QWHLQPLEPLQNLPGLLRDQPSVLLSGSREHELVRTELDAAAFPATVIARLNEPNLQEPI
HCCCCCHHHHHCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PLFAPRRQPLPNTEIYAEHLLDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
VHETTAPESNGVVCCRWAWWLHHQDQLPLPEQLIVALLPLASVESPLTAARVESLKNQGL
HHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
DWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA