| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863988
Identifier: 33863988
GI number: 33863988
Start: 1824122
End: 1824511
Strand: Direct
Name: 33863988
Synonym: PMT1721
Alternate gene names: NA
Gene position: 1824122-1824511 (Clockwise)
Preceding gene: 33863985
Following gene: 33863990
Centisome position: 75.66
GC content: 50.26
Gene sequence:
>390_bases ATGAGCGACATCAACACCGTGACAAACGAACAATCCACCACAGAAAAGACCACCACAAACAGCGTTGATAACGCAGATCA GGAGATTAAATTCTCAGAGCGTTACAGCGAAGCCGTTGGCAAGGTCAACGAAACCCTAAACAAGCTCGATTGGAGCCAGA TGGGGCGCATCGGCAAGGTTTTAGGCATCTTTGCAGCTGTGATTGTTGCCCAGATCCTGATCAAGGGAGTGATGGACACA ATCAATTTGCTACCAATCGTGCCTGGACTGCTCGAACTGCTTGGTGTGGTGATGGTGGGCCAATGGAGCTGGCAAAACCT CACCACCAGTGAGAAGCGCTCTGCACTGTCTGAAAGGGTTCAGAACCTCCGCAAGGAATATTTAGGCTGA
Upstream 100 bases:
>100_bases CGAAGAACCATCAGGCAATTACGATCAAACTCCAGCAGCCCTGGCATAACAAAGATCCTTTCGATACGCTCGGCAAAGAT TTGCCATCGGTTTCGTGTTC
Downstream 100 bases:
>100_bases ACATTGCAAATCCAAATGCAATTCAAGTCAGCAACCAACTTGCCAAACGATTCAGAATGGCTTGGCTCTGATTTCGATAT GAGCCTCCAAACAGATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSDINTVTNEQSTTEKTTTNSVDNADQEIKFSERYSEAVGKVNETLNKLDWSQMGRIGKVLGIFAAVIVAQILIKGVMDT INLLPIVPGLLELLGVVMVGQWSWQNLTTSEKRSALSERVQNLRKEYLG
Sequences:
>Translated_129_residues MSDINTVTNEQSTTEKTTTNSVDNADQEIKFSERYSEAVGKVNETLNKLDWSQMGRIGKVLGIFAAVIVAQILIKGVMDT INLLPIVPGLLELLGVVMVGQWSWQNLTTSEKRSALSERVQNLRKEYLG >Mature_128_residues SDINTVTNEQSTTEKTTTNSVDNADQEIKFSERYSEAVGKVNETLNKLDWSQMGRIGKVLGIFAAVIVAQILIKGVMDTI NLLPIVPGLLELLGVVMVGQWSWQNLTTSEKRSALSERVQNLRKEYLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14328; Mature: 14196
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDINTVTNEQSTTEKTTTNSVDNADQEIKFSERYSEAVGKVNETLNKLDWSQMGRIGKV CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LGIFAAVIVAQILIKGVMDTINLLPIVPGLLELLGVVMVGQWSWQNLTTSEKRSALSERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH QNLRKEYLG HHHHHHHCC >Mature Secondary Structure SDINTVTNEQSTTEKTTTNSVDNADQEIKFSERYSEAVGKVNETLNKLDWSQMGRIGKV CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LGIFAAVIVAQILIKGVMDTINLLPIVPGLLELLGVVMVGQWSWQNLTTSEKRSALSERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH QNLRKEYLG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA