| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yaeT [C]
Identifier: 33863680
GI number: 33863680
Start: 1498742
End: 1501030
Strand: Reverse
Name: yaeT [C]
Synonym: PMT1413
Alternate gene names: 33863680
Gene position: 1501030-1498742 (Counterclockwise)
Preceding gene: 33863681
Following gene: 33863679
Centisome position: 62.26
GC content: 49.63
Gene sequence:
>2289_bases ATGGCCAGCTTCCTATCTAGCGGACCCTCGGATGCCTTGCGGCGAGGTGCATTTGGCCTGGTTCTGGCCTTGCCGCTTCT TGCTGCTCCTGCGCGCGCTCAGACACCAGAGCAGGACACTCAGCCCCCAGCTGCGGAGATCTTGGTCAACGATGATGTGC AGGTGGAGGAGGTGGCCACTCCTGAAGGCGTCGCCGAGGAAAGCCTGGGTATCGAGCAGATTCAGGTTACCCCTGCAGAG CAGCAAGAGCTGCCTCTCAACGCATCTGAACAGCTGTCTGAGGAGCCTCGTGTCTTGATCACCGAGGTGATCATCGAAGG GATTGCAGGCCATCCGGAGCAAGAGCGTGTAGAACTCGCCGCTTATGACGCCATGGTTGTGCGTCCCGGTAGTCGTGTGA CTCGAGATGAGCTCAAACGTGATCTCGATGCGATTTACGCCACGGGTTGGTTTTCTGATGTGCGCATTGAGCCGAGTGAC GGCCCTTTAGGGGTTCAGCTCGTGGTGCAGGTGCAGCCCAATCCATTGCTCACCAAAGTGGAACTTGATCCACCTGATGT TGGGCTTTCTGAATCTGTGATTGAGGAAACATTCCTCCCCGACTACGGCAGGACTCTCAATCTCAATGAACTGCAGGCTC GTATGAAGGAGTTGCAGCAGTGGTACGCAAACGAGGGCTATTCCCTGGCTCGGGTCACCGGCCCTACGCGCGTTTCTCCA GAGGGAGTGGTGCAGCTCAAGGTGACCCAGGGCACGGTTGCAGGGGTGGAAGTGCAGTTCCTAAATAAGGAAGGTGATTC CACCGATGAGAAGGGTGAGCCGATTAATGGCAAGACCAAGCCCTGGGTGATTACACGAGAGATATCAATCAAGCCTGGCG AAGTATTTAATCGAAATCAGCTTGAGGCAGATATTAAGCGCCTATATGGCACATCTCTTTTCAGTGATGTCAAAGTCACC CTGAAACCGGTTGCTGGTGAACCTGGCAATGTGACAATCATTCTTGGCATTGTTGAGCAGTCCACCGGTTCGTTGTCAGG TGGCCTGGGTTATAGCCAGAGTCAGGGTGTCTTTGGCCAGATACAACTTCAGGACAGCAATCTTCTTGGTCGTGCCTGGA ATATGGCATTGAACATTACTTATGGTCAGTATGGAGGCTTAGGAAGCATTTCATTTACGGATCCATGGATTAAGGGTGAT GCTCACCGCACCTCATTCCGGACCTCTATATTTTTAAGTCGTGAGGTGCCTCAAGTTTTTCAGAGCCAAAATAATGGCAA TATTCGCACCCTTAAAGATTACTATGATGGTGGCTCTAGTTACGCATATGATATAGATGAAAATGATAACCCTGCGGGAA GGAAATTTGATTCAGTTTCTGATGCAGAGAACGCAGACTCAAATGCTAGTTGGTTTGACTATGAAGGGAATTCTGTTGCT TTGCAAAGAATTGGTGGAAATATAATTTTTGCAAGACCTCTTAATGGTGGTGATCCATACAAGAAAGCACCGTGGAATGT CTTGGCTGGCTTGAATATTCAGAAGGTCAGGCCGATCAACTTCTCTGGCGATAGCCGTCCTTATGGTGTGGCAAATGATG ACATTGAGGATGGCCGCGTGCCTGATGACGATGTGATTTGTATCGCTTTTGATTGTGCAGATGAAAACAACCTTCTTGGT GTAAGAGTCGCGGCTACTTATAATAATTTGAATGACCCTCGTAATCCAACTTCTGGCAACTTCTTTAGTTTTGGTACTGA GCAATTTGTATCTGTCGGGGAGCATTCACCGACCTTTAACCGTCTTCGGACTAGCTATACACATTTCATTCCAGTTAATT GGTTGAAACTTGCCAAGGGCTGTCGTCCTAAGCCAGGGGAACAGGAAAATTGTCCTCAGGCCCTTGCTTTTCAGGTTAAG GCAGGCACGGTTTTAGGTGATCTGCCTCCTTATGAGGCTTTCTGTCTTGGTGGATCTAATTCCGTAAGAGGTTGGAGTGA TTGTGATTTATCTGTGGGCCGAAGCTTTGTTGAAGCGACGATTGAATATCGATTCCCGATTTGGAATATCGTCTCTGGTG AGGTTTTCGTTGATGGCGGTACTGATTTAGGCTCCCAAGAGAATGTTCCTGGTAAGCCAGGCAAACTTCTCGACAAGCCT GGTTCTGGTTTCTCGCTAGGTTCTGGTCTGATTGTTACCACTCCAGTAGGGCCATTGCGCCTTGAGGTTGCAACACAGGA TTTCACCGATGAGTGGCGCTTTAATCTCGGGGTTGGCTGGAAGTTCTAG
Upstream 100 bases:
>100_bases GGAGATCCTCAAACGGGTCCAAGGGGTATGAGCTAATTCCTACAACTGCAGGTAATGTCAGCGCACATTTGGCGGCTCTG TAGCCGGATTCCTATCACCC
Downstream 100 bases:
>100_bases TGGCTTTTTGGCCTACGAGTTATGACCGTGCTTGGACCCTAGGCGGAGCTGTCTCAAGACAAGGGATTGGGCTTCATGGT GGGGAGGTCGCCGAGGTGCG
Product: chloroplast outer envelope membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Envelope Membrane Protein; Outer Envelope Membrane Protein-Like Protein; OmpIP Family Outer Membrane Porin; Outer Envelope Membrane Protein-Like; Surface Antigen Variable Number; Ic Outer Envelope Membrane Protein; Outer Membrane Protein / Surface Antigene; Tetratricopeptide Repeat Family; OMP85 Family Membrane Protein; Import-Associated Channel Protein IAP; LOW QUALITY PROTEIN Outer Membrane Protein; Outer Membrane Family; OMP85 Family Outer Membrane Protein; Import-Associated Channel IAP
Number of amino acids: Translated: 762; Mature: 761
Protein sequence:
>762_residues MASFLSSGPSDALRRGAFGLVLALPLLAAPARAQTPEQDTQPPAAEILVNDDVQVEEVATPEGVAEESLGIEQIQVTPAE QQELPLNASEQLSEEPRVLITEVIIEGIAGHPEQERVELAAYDAMVVRPGSRVTRDELKRDLDAIYATGWFSDVRIEPSD GPLGVQLVVQVQPNPLLTKVELDPPDVGLSESVIEETFLPDYGRTLNLNELQARMKELQQWYANEGYSLARVTGPTRVSP EGVVQLKVTQGTVAGVEVQFLNKEGDSTDEKGEPINGKTKPWVITREISIKPGEVFNRNQLEADIKRLYGTSLFSDVKVT LKPVAGEPGNVTIILGIVEQSTGSLSGGLGYSQSQGVFGQIQLQDSNLLGRAWNMALNITYGQYGGLGSISFTDPWIKGD AHRTSFRTSIFLSREVPQVFQSQNNGNIRTLKDYYDGGSSYAYDIDENDNPAGRKFDSVSDAENADSNASWFDYEGNSVA LQRIGGNIIFARPLNGGDPYKKAPWNVLAGLNIQKVRPINFSGDSRPYGVANDDIEDGRVPDDDVICIAFDCADENNLLG VRVAATYNNLNDPRNPTSGNFFSFGTEQFVSVGEHSPTFNRLRTSYTHFIPVNWLKLAKGCRPKPGEQENCPQALAFQVK AGTVLGDLPPYEAFCLGGSNSVRGWSDCDLSVGRSFVEATIEYRFPIWNIVSGEVFVDGGTDLGSQENVPGKPGKLLDKP GSGFSLGSGLIVTTPVGPLRLEVATQDFTDEWRFNLGVGWKF
Sequences:
>Translated_762_residues MASFLSSGPSDALRRGAFGLVLALPLLAAPARAQTPEQDTQPPAAEILVNDDVQVEEVATPEGVAEESLGIEQIQVTPAE QQELPLNASEQLSEEPRVLITEVIIEGIAGHPEQERVELAAYDAMVVRPGSRVTRDELKRDLDAIYATGWFSDVRIEPSD GPLGVQLVVQVQPNPLLTKVELDPPDVGLSESVIEETFLPDYGRTLNLNELQARMKELQQWYANEGYSLARVTGPTRVSP EGVVQLKVTQGTVAGVEVQFLNKEGDSTDEKGEPINGKTKPWVITREISIKPGEVFNRNQLEADIKRLYGTSLFSDVKVT LKPVAGEPGNVTIILGIVEQSTGSLSGGLGYSQSQGVFGQIQLQDSNLLGRAWNMALNITYGQYGGLGSISFTDPWIKGD AHRTSFRTSIFLSREVPQVFQSQNNGNIRTLKDYYDGGSSYAYDIDENDNPAGRKFDSVSDAENADSNASWFDYEGNSVA LQRIGGNIIFARPLNGGDPYKKAPWNVLAGLNIQKVRPINFSGDSRPYGVANDDIEDGRVPDDDVICIAFDCADENNLLG VRVAATYNNLNDPRNPTSGNFFSFGTEQFVSVGEHSPTFNRLRTSYTHFIPVNWLKLAKGCRPKPGEQENCPQALAFQVK AGTVLGDLPPYEAFCLGGSNSVRGWSDCDLSVGRSFVEATIEYRFPIWNIVSGEVFVDGGTDLGSQENVPGKPGKLLDKP GSGFSLGSGLIVTTPVGPLRLEVATQDFTDEWRFNLGVGWKF >Mature_761_residues ASFLSSGPSDALRRGAFGLVLALPLLAAPARAQTPEQDTQPPAAEILVNDDVQVEEVATPEGVAEESLGIEQIQVTPAEQ QELPLNASEQLSEEPRVLITEVIIEGIAGHPEQERVELAAYDAMVVRPGSRVTRDELKRDLDAIYATGWFSDVRIEPSDG PLGVQLVVQVQPNPLLTKVELDPPDVGLSESVIEETFLPDYGRTLNLNELQARMKELQQWYANEGYSLARVTGPTRVSPE GVVQLKVTQGTVAGVEVQFLNKEGDSTDEKGEPINGKTKPWVITREISIKPGEVFNRNQLEADIKRLYGTSLFSDVKVTL KPVAGEPGNVTIILGIVEQSTGSLSGGLGYSQSQGVFGQIQLQDSNLLGRAWNMALNITYGQYGGLGSISFTDPWIKGDA HRTSFRTSIFLSREVPQVFQSQNNGNIRTLKDYYDGGSSYAYDIDENDNPAGRKFDSVSDAENADSNASWFDYEGNSVAL QRIGGNIIFARPLNGGDPYKKAPWNVLAGLNIQKVRPINFSGDSRPYGVANDDIEDGRVPDDDVICIAFDCADENNLLGV RVAATYNNLNDPRNPTSGNFFSFGTEQFVSVGEHSPTFNRLRTSYTHFIPVNWLKLAKGCRPKPGEQENCPQALAFQVKA GTVLGDLPPYEAFCLGGSNSVRGWSDCDLSVGRSFVEATIEYRFPIWNIVSGEVFVDGGTDLGSQENVPGKPGKLLDKPG SGFSLGSGLIVTTPVGPLRLEVATQDFTDEWRFNLGVGWKF
Specific function: Unknown
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82961; Mature: 82830
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFLSSGPSDALRRGAFGLVLALPLLAAPARAQTPEQDTQPPAAEILVNDDVQVEEVAT CCCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEECCCCEEEECCC PEGVAEESLGIEQIQVTPAEQQELPLNASEQLSEEPRVLITEVIIEGIAGHPEQERVELA CCCCHHHCCCCEEEEECCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHEEEE AYDAMVVRPGSRVTRDELKRDLDAIYATGWFSDVRIEPSDGPLGVQLVVQVQPNPLLTKV EEEEEEECCCCCCCHHHHHHHHHHEEEECCEEEEEEECCCCCEEEEEEEEECCCCCEEEE ELDPPDVGLSESVIEETFLPDYGRTLNLNELQARMKELQQWYANEGYSLARVTGPTRVSP ECCCCCCCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC EGVVQLKVTQGTVAGVEVQFLNKEGDSTDEKGEPINGKTKPWVITREISIKPGEVFNRNQ CCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH LEADIKRLYGTSLFSDVKVTLKPVAGEPGNVTIILGIVEQSTGSLSGGLGYSQSQGVFGQ HHHHHHHHHCCHHHCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEE IQLQDSNLLGRAWNMALNITYGQYGGLGSISFTDPWIKGDAHRTSFRTSIFLSREVPQVF EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHH QSQNNGNIRTLKDYYDGGSSYAYDIDENDNPAGRKFDSVSDAENADSNASWFDYEGNSVA HCCCCCCEEEEHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE LQRIGGNIIFARPLNGGDPYKKAPWNVLAGLNIQKVRPINFSGDSRPYGVANDDIEDGRV EEECCCCEEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC PDDDVICIAFDCADENNLLGVRVAATYNNLNDPRNPTSGNFFSFGTEQFVSVGEHSPTFN CCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHCCCCCCHHH RLRTSYTHFIPVNWLKLAKGCRPKPGEQENCPQALAFQVKAGTVLGDLPPYEAFCLGGSN HHHHCCEEEEECHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEECCCC SVRGWSDCDLSVGRSFVEATIEYRFPIWNIVSGEVFVDGGTDLGSQENVPGKPGKLLDKP CCCCCCCCCHHHCHHEEEEEEEEECCEEEEEECEEEEECCCCCCCCCCCCCCCCHHCCCC GSGFSLGSGLIVTTPVGPLRLEVATQDFTDEWRFNLGVGWKF CCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure ASFLSSGPSDALRRGAFGLVLALPLLAAPARAQTPEQDTQPPAAEILVNDDVQVEEVAT CCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEECCCCEEEECCC PEGVAEESLGIEQIQVTPAEQQELPLNASEQLSEEPRVLITEVIIEGIAGHPEQERVELA CCCCHHHCCCCEEEEECCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHEEEE AYDAMVVRPGSRVTRDELKRDLDAIYATGWFSDVRIEPSDGPLGVQLVVQVQPNPLLTKV EEEEEEECCCCCCCHHHHHHHHHHEEEECCEEEEEEECCCCCEEEEEEEEECCCCCEEEE ELDPPDVGLSESVIEETFLPDYGRTLNLNELQARMKELQQWYANEGYSLARVTGPTRVSP ECCCCCCCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC EGVVQLKVTQGTVAGVEVQFLNKEGDSTDEKGEPINGKTKPWVITREISIKPGEVFNRNQ CCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH LEADIKRLYGTSLFSDVKVTLKPVAGEPGNVTIILGIVEQSTGSLSGGLGYSQSQGVFGQ HHHHHHHHHCCHHHCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEE IQLQDSNLLGRAWNMALNITYGQYGGLGSISFTDPWIKGDAHRTSFRTSIFLSREVPQVF EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHH QSQNNGNIRTLKDYYDGGSSYAYDIDENDNPAGRKFDSVSDAENADSNASWFDYEGNSVA HCCCCCCEEEEHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE LQRIGGNIIFARPLNGGDPYKKAPWNVLAGLNIQKVRPINFSGDSRPYGVANDDIEDGRV EEECCCCEEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC PDDDVICIAFDCADENNLLGVRVAATYNNLNDPRNPTSGNFFSFGTEQFVSVGEHSPTFN CCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHCCCCCCHHH RLRTSYTHFIPVNWLKLAKGCRPKPGEQENCPQALAFQVKAGTVLGDLPPYEAFCLGGSN HHHHCCEEEEECHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEECCCC SVRGWSDCDLSVGRSFVEATIEYRFPIWNIVSGEVFVDGGTDLGSQENVPGKPGKLLDKP CCCCCCCCCHHHCHHEEEEEEEEECCEEEEEECEEEEECCCCCCCCCCCCCCCCHHCCCC GSGFSLGSGLIVTTPVGPLRLEVATQDFTDEWRFNLGVGWKF CCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA