| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yagG [C]
Identifier: 33863665
GI number: 33863665
Start: 1484724
End: 1486079
Strand: Direct
Name: yagG [C]
Synonym: PMT1398
Alternate gene names: 33863665
Gene position: 1484724-1486079 (Clockwise)
Preceding gene: 33863664
Following gene: 33863666
Centisome position: 61.58
GC content: 57.3
Gene sequence:
>1356_bases ATGATCTCCTATGGCCTTGGCGATGCAGGCACCGGGCTGGCAGCAACTCTGCTCGGCTTCTACCTCTTCGTGTTTTTTAC CGGGACCGCCGGGCTGCCTGCAATTGTTGCCGGCTCACTGCTGATGGTGATCAAGCTCTGGGATGGGATCAATGACCCAA TGATCGGCTGGCTGAGCGATCACACCCAAACTCGTTGGGGCCCAAGGATTCCCTGGATGCTTGGCGCAGCACTGCCCCTC GGCATCAGCCTGGCTGCCATGTGGTGGGTTCCTCCCGGAGACGTTGCCCAGAAAACGATGTATTACATCGTGATGGCGAT TCTGCTGATGACCGCCTACACCAGCGTCAATCTGCCTTACTCCGCCCTCTCCACAGAGCTCACAGAAAACACATCTGTGC GCAACCGTCTCAACGCCGCCAGATTCACCGGATCAATCATCGCTGGTGCAAGCGGCTTGATTGTGACGCCTTTACTGCTG GTCAACGGTGCCAACGGTTACTTGGCCATGGGCCGCATCACCGGCACAATCGCAGCTTTAGCCACCCTCGCCTGCTGCTG GGGGCTGGCCCCTTTCACAAAAACCGCTAGGCGCCCCAGTTGCCATCACGAGCCCCTACGTCGACAGCTTGCGAGGATCA TCAGCAACAGACGCTTCCTCAAAGTTCTGGGGCTTTACCTGTTGCTCTGGTGCGCTTTGCAGTTGATGCAGCCAGTTGCT CTGATCTACCTCGTTCAGTTGATGCGCGTACCCGCAGAACTGGCCACCTGGATGTTGCTGCCCTTCCAGCTCTGCGCCCT GATCGGCCTTCAGGTCTGGAGCATGTATGCCAATCGCCATGGGCGAATAAGGGCCCTGTGCTGGGGTGGGTGTCTATGGA TCGCTGCTTGTGTTGTTTCGATGCTGCTCCCCCCCCTCTCCGCTGATGCATCCCTCGCCAACCTTTGGCCTACAGCCGGC ACTGATGGTCTGAGATTGATGGCTTTGTTGGCCACCATTGGGACGGTGGGATTTGGAGCCGCAAATGCTTATCTGATCCC TTGGTGTCTGCTACCAGATGCAATTGATGCTGACCCTGACAAGCCAGCAGGCCTCTACACCGCCTGGATGGTGCTGGTTC AGAAAATCGGTATTGGTGTGAGCATCCAACTGCTCGGCATCCTGCTTTCACTGTCTGGCTATCGCTCAGTGGTAGAAGCA GGCGGAGCACTGAGCTACTCGGATCAACCCGAATCCGCTCTGATCACCATTCGCATGTGCATGGGATTCATTCCCGCAGT ACTTGTGGCGTTGGGTCTTGTGGTGATGCGAGGCTGGCCCGAAAGGAACTCTCACAACCAGGCAGCCATGTCATGA
Upstream 100 bases:
>100_bases GGTCTGCGGTTCAGTGCCCCTGCATTATGACCTTGCGCATCCCCCTTTTTGCAGCTTGACGATATCCACAGCGCTTCAAG AGGGATCACGCCGCCGGCTG
Downstream 100 bases:
>100_bases CGACTCCTCGCTGGCTGAAGCGACTGGGCAACAGCCTCATCATCGGAGGCCAGGCAGTGGCAGCCACCGCCCGAGGTCGT ATCAACAAGGTCGACCTGTT
Product: GPH family sugar transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MISYGLGDAGTGLAATLLGFYLFVFFTGTAGLPAIVAGSLLMVIKLWDGINDPMIGWLSDHTQTRWGPRIPWMLGAALPL GISLAAMWWVPPGDVAQKTMYYIVMAILLMTAYTSVNLPYSALSTELTENTSVRNRLNAARFTGSIIAGASGLIVTPLLL VNGANGYLAMGRITGTIAALATLACCWGLAPFTKTARRPSCHHEPLRRQLARIISNRRFLKVLGLYLLLWCALQLMQPVA LIYLVQLMRVPAELATWMLLPFQLCALIGLQVWSMYANRHGRIRALCWGGCLWIAACVVSMLLPPLSADASLANLWPTAG TDGLRLMALLATIGTVGFGAANAYLIPWCLLPDAIDADPDKPAGLYTAWMVLVQKIGIGVSIQLLGILLSLSGYRSVVEA GGALSYSDQPESALITIRMCMGFIPAVLVALGLVVMRGWPERNSHNQAAMS
Sequences:
>Translated_451_residues MISYGLGDAGTGLAATLLGFYLFVFFTGTAGLPAIVAGSLLMVIKLWDGINDPMIGWLSDHTQTRWGPRIPWMLGAALPL GISLAAMWWVPPGDVAQKTMYYIVMAILLMTAYTSVNLPYSALSTELTENTSVRNRLNAARFTGSIIAGASGLIVTPLLL VNGANGYLAMGRITGTIAALATLACCWGLAPFTKTARRPSCHHEPLRRQLARIISNRRFLKVLGLYLLLWCALQLMQPVA LIYLVQLMRVPAELATWMLLPFQLCALIGLQVWSMYANRHGRIRALCWGGCLWIAACVVSMLLPPLSADASLANLWPTAG TDGLRLMALLATIGTVGFGAANAYLIPWCLLPDAIDADPDKPAGLYTAWMVLVQKIGIGVSIQLLGILLSLSGYRSVVEA GGALSYSDQPESALITIRMCMGFIPAVLVALGLVVMRGWPERNSHNQAAMS >Mature_451_residues MISYGLGDAGTGLAATLLGFYLFVFFTGTAGLPAIVAGSLLMVIKLWDGINDPMIGWLSDHTQTRWGPRIPWMLGAALPL GISLAAMWWVPPGDVAQKTMYYIVMAILLMTAYTSVNLPYSALSTELTENTSVRNRLNAARFTGSIIAGASGLIVTPLLL VNGANGYLAMGRITGTIAALATLACCWGLAPFTKTARRPSCHHEPLRRQLARIISNRRFLKVLGLYLLLWCALQLMQPVA LIYLVQLMRVPAELATWMLLPFQLCALIGLQVWSMYANRHGRIRALCWGGCLWIAACVVSMLLPPLSADASLANLWPTAG TDGLRLMALLATIGTVGFGAANAYLIPWCLLPDAIDADPDKPAGLYTAWMVLVQKIGIGVSIQLLGILLSLSGYRSVVEA GGALSYSDQPESALITIRMCMGFIPAVLVALGLVVMRGWPERNSHNQAAMS
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]
Homologues:
Organism=Homo sapiens, GI42713696, Length=488, Percent_Identity=23.9754098360656, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI211063479, Length=501, Percent_Identity=23.5528942115768, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1786466, Length=451, Percent_Identity=25.9423503325942, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI87082306, Length=456, Percent_Identity=24.3421052631579, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790561, Length=250, Percent_Identity=25.2, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI48994989, Length=408, Percent_Identity=23.0392156862745, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1787902, Length=142, Percent_Identity=31.6901408450704, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI145693206, Length=362, Percent_Identity=21.8232044198895, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016196 - InterPro: IPR001927 - InterPro: IPR018043 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48548; Mature: 48548
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISYGLGDAGTGLAATLLGFYLFVFFTGTAGLPAIVAGSLLMVIKLWDGINDPMIGWLSD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCC HTQTRWGPRIPWMLGAALPLGISLAAMWWVPPGDVAQKTMYYIVMAILLMTAYTSVNLPY CCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH SALSTELTENTSVRNRLNAARFTGSIIAGASGLIVTPLLLVNGANGYLAMGRITGTIAAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCEEEHHHHHHHHHH ATLACCWGLAPFTKTARRPSCHHEPLRRQLARIISNRRFLKVLGLYLLLWCALQLMQPVA HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LIYLVQLMRVPAELATWMLLPFQLCALIGLQVWSMYANRHGRIRALCWGGCLWIAACVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH MLLPPLSADASLANLWPTAGTDGLRLMALLATIGTVGFGAANAYLIPWCLLPDAIDADPD HHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCC KPAGLYTAWMVLVQKIGIGVSIQLLGILLSLSGYRSVVEAGGALSYSDQPESALITIRMC CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH MGFIPAVLVALGLVVMRGWPERNSHNQAAMS HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC >Mature Secondary Structure MISYGLGDAGTGLAATLLGFYLFVFFTGTAGLPAIVAGSLLMVIKLWDGINDPMIGWLSD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCC HTQTRWGPRIPWMLGAALPLGISLAAMWWVPPGDVAQKTMYYIVMAILLMTAYTSVNLPY CCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH SALSTELTENTSVRNRLNAARFTGSIIAGASGLIVTPLLLVNGANGYLAMGRITGTIAAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCEEEHHHHHHHHHH ATLACCWGLAPFTKTARRPSCHHEPLRRQLARIISNRRFLKVLGLYLLLWCALQLMQPVA HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LIYLVQLMRVPAELATWMLLPFQLCALIGLQVWSMYANRHGRIRALCWGGCLWIAACVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH MLLPPLSADASLANLWPTAGTDGLRLMALLATIGTVGFGAANAYLIPWCLLPDAIDADPD HHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCC KPAGLYTAWMVLVQKIGIGVSIQLLGILLSLSGYRSVVEAGGALSYSDQPESALITIRMC CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH MGFIPAVLVALGLVVMRGWPERNSHNQAAMS HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]