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The map label for this gene is yrbE [C]

Identifier: 33863666

GI number: 33863666

Start: 1486076

End: 1486822

Strand: Direct

Name: yrbE [C]

Synonym: PMT1399

Alternate gene names: 33863666

Gene position: 1486076-1486822 (Clockwise)

Preceding gene: 33863665

Following gene: 33863667

Centisome position: 61.64

GC content: 55.69

Gene sequence:

>747_bases
ATGACGACTCCTCGCTGGCTGAAGCGACTGGGCAACAGCCTCATCATCGGAGGCCAGGCAGTGGCAGCCACCGCCCGAGG
TCGTATCAACAAGGTCGACCTGTTTGATCAGCTGATGGAGGCCGGTCCAGGCAGCTTCCTGATTGTGTTGATCACAGGCT
TAGCCGCAGGAACGGTCTTCAACATCCAGGTCGCCGCAGAACTGAGCCGACAAGGTGCTGGATCCACGGTAGGAGGGATT
CTCGCCATTGGGATGGCAAGGGAAATCGCCCCTCTTCTCACCGCCACGCTGCTCACTGGCAAGGTAGCCACGGCCTATGC
AGCTCAGCTAGGGACCATGAAGGTCACTGAACAGATCGATGCCATCACCATGTTGCGAACCGAACCGGTTGAGTACTTGG
TGGTTCCAAGAGTGATCGCCATGGTGGTCATGGCACCAGTGCAATGCATTCTGTTCTTCGGCATAGCCCTCTGGAGCGGC
CAGGTCAGCAGCACCAATCTTTATCAAATTCCACCAGAGGTCTTCTGGAATTCCGTGCGCACTTGGCTGACTCCGGATGA
TTTGCCATTCATGCTGATCAAATCATTGGTGTTCGGCCTTCAGATTGCTGTTCTGGCTTGCGGGTGGGGTCTCACAACGC
GTGGTGGTCCAAAAGAAGTTGGCACCAGCACCACTGGCGCCGTTGTGATGACTCTGGTCACAGTGTCTTTGATGGATGTC
TTGCTCACCCAGATTCTTTTCAGCTGA

Upstream 100 bases:

>100_bases
GCATGTGCATGGGATTCATTCCCGCAGTACTTGTGGCGTTGGGTCTTGTGGTGATGCGAGGCTGGCCCGAAAGGAACTCT
CACAACCAGGCAGCCATGTC

Downstream 100 bases:

>100_bases
TGTCATCAAGGCCCACAAACAAACGCGCAGCTATTGACAAATCCTGCTTGCCCCCATATCGGTCCTAAATCAGTGATGGG
TCCAGATCGGCCCTCTCTCA

Product: transporter membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTTPRWLKRLGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTVGGI
LAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPRVIAMVVMAPVQCILFFGIALWSG
QVSSTNLYQIPPEVFWNSVRTWLTPDDLPFMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
LLTQILFS

Sequences:

>Translated_248_residues
MTTPRWLKRLGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTVGGI
LAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPRVIAMVVMAPVQCILFFGIALWSG
QVSSTNLYQIPPEVFWNSVRTWLTPDDLPFMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
LLTQILFS
>Mature_247_residues
TTPRWLKRLGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTVGGIL
AIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPRVIAMVVMAPVQCILFFGIALWSGQ
VSSTNLYQIPPEVFWNSVRTWLTPDDLPFMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVL
LTQILFS

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=244, Percent_Identity=26.2295081967213, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26339; Mature: 26207

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPRWLKRLGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVF
CCCHHHHHHCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCEE
NIQVAAELSRQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQID
EEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AITMLRTEPVEYLVVPRVIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH
TWLTPDDLPFMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHH
LLTQILFS
HHHHHHCC
>Mature Secondary Structure 
TTPRWLKRLGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVF
CCHHHHHHCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCEE
NIQVAAELSRQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQID
EEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AITMLRTEPVEYLVVPRVIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH
TWLTPDDLPFMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHH
LLTQILFS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]