| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863129
Identifier: 33863129
GI number: 33863129
Start: 938489
End: 939121
Strand: Direct
Name: 33863129
Synonym: PMT0857
Alternate gene names: NA
Gene position: 938489-939121 (Clockwise)
Preceding gene: 33863125
Following gene: 33863130
Centisome position: 38.93
GC content: 39.02
Gene sequence:
>633_bases GTGACACGAAAGAGAAGATATGCGGCCAAAATAATACCCTTATCCGATACATTTCATGTTAATACGTTGTTTTTTTACTT CTCCGGTGCTAGCATTAAGGAATATCAGCCTTCCAGTCATCAACATCAAAACGTGCTTAGAGAGCTGATTATTAGACCTA ATCAAAATTGCCTTGCATCCTTTTTGAAGAGGTGTACAAACCTGAATTCCACGAGTTGGATTGAAACGTCCATTTTAGTG ATTGGCACCTTTGGTTTCGCTGTCCTGATGCATATAGCGCCTGTAAGGGCAACTCCACTCAAGCTCATGTGCTCTTACAT CTATGAAGGCAAAGCATATAAGGAAATATACATTGTCGACCCCGAGAAATTATTAGTAGAGATAAGTTATCCATTTGCAC CATCTGAAGAAGATAGAAATATCATCGAGAGACTTATCGTTGAATCAATCTCACCAGTTATTGTTGTTGCTAGACTTCAA ACAAGCAACAGTCATTACTTCAAATATGAGATCAACAAAGTAAACCTTGAGATCAAAACATTTTCAGTAAGCCTTGTCGC CGGAGTTCAGGCGATGACAACCCGTACTTGCAAGAGAATTAAAGATGCTCCTAGCCATCAGATCAAGATTTAA
Upstream 100 bases:
>100_bases ATGAGATTTCTATACGATATGTTTAGAAAAGTACAGATTAAGTACGCCAATATCTATCCAAAATATTAAATTATCAATAG ATAAGTAAGCAAATCTGTCC
Downstream 100 bases:
>100_bases AACTCTAATAGTGGCTTCAATTCACTTAGTTAAGGCTAGGCCAACCTAATGCAGAAAAGCTATACACAATGAGTAAGTTT GAAGGAATATAACCATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLASFLKRCTNLNSTSWIETSILV IGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVDPEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQ TSNSHYFKYEINKVNLEIKTFSVSLVAGVQAMTTRTCKRIKDAPSHQIKI
Sequences:
>Translated_210_residues MTRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLASFLKRCTNLNSTSWIETSILV IGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVDPEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQ TSNSHYFKYEINKVNLEIKTFSVSLVAGVQAMTTRTCKRIKDAPSHQIKI >Mature_209_residues TRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLASFLKRCTNLNSTSWIETSILVI GTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVDPEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQT SNSHYFKYEINKVNLEIKTFSVSLVAGVQAMTTRTCKRIKDAPSHQIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24076; Mature: 23945
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLAS CCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH FLKRCTNLNSTSWIETSILVIGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVD HHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEC PEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQTSNSHYFKYEINKVNLEIKT HHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEEEEEEE FSVSLVAGVQAMTTRTCKRIKDAPSHQIKI EEEEEHHHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure TRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLAS CCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH FLKRCTNLNSTSWIETSILVIGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVD HHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEC PEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQTSNSHYFKYEINKVNLEIKT HHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEEEEEEE FSVSLVAGVQAMTTRTCKRIKDAPSHQIKI EEEEEHHHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA