| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is fur [H]
Identifier: 33863130
GI number: 33863130
Start: 939703
End: 940515
Strand: Direct
Name: fur [H]
Synonym: PMT0858
Alternate gene names: 33863130
Gene position: 939703-940515 (Clockwise)
Preceding gene: 33863129
Following gene: 33863133
Centisome position: 38.98
GC content: 50.06
Gene sequence:
>813_bases GTGCCCAGCCAGCGGACAGGGAACAATCAACAGGCAGTGGCAAAAGTCATCAAGGGCCAAACAATCTGGCCTTACACCGA CTTTTACTTCGCGGGATGGGGTCTAGCCTCTAATAAGTATCATCTTACATGCAGGCGAGGCTACAACAGCCTAGTAGCGC TATCAGGCCTTGCCACAAAGGCAGAAGGATCAACTATTGGCTTGGCTCAAACAACTTTAAAGAAACAACGCGATCGACCT TCAGAGGCTGCCTTGCTTGCAGGAATCTCAAACCATCAATTGCGCCAATCACTCTCATTAGCGGTTACTGTTGAGAAATG CATTGCAGAGGTGGCCTTGCCTACTTCTTCGTCCCTGGCCCGTATCCATGGACAACTTGAGGTTGGCTTGCATCAGGGTG GTCGACGTTTAACGCCTCAAAGACGCCGCGTTCTTGATCTCTTTGAAAGTATTGGTTCTGGCATTCACCTCAGTGCTGAA GAAGTGCATCGGCAACTTCTAGAAGCAAACTCGAAGGTGTCTCTAGCAACGATCTACCGCACGCTGCGCTTGCTTGTCGA CATGGGCTTTCTACACGAGTTGGAAATAAGCGATGGCGGACATCGCTTTGAATTAGCAAGTCACGACCATCCTGATCATC ACCATTTGGTATGCGTGCGTTGTGGTCGTACTGAGGAGTTTGAGAGCAAACCAGTACTGGAAGCTGGACGCTCTGCTGCT GAGCGAATCGGGTTCCAACTGATCGAGTCAACCTTGAATGTAAGGGCTCTATGTCCGTCTTGTCAGAGACCCTCTACAAC CAATGTCCATTGA
Upstream 100 bases:
>100_bases CACAGACTCTCGCAGCACATCCCACAGACAAAGCATCTCACAACCTTTTAGGCCACAAAGATAAGCACTCTTTGATCAAC TTCAAGGTGTTAGCTGTCAC
Downstream 100 bases:
>100_bases TGGCTGATGACAAACATCAATGCTGAGAATGCTGATCGCACGGCATCCAATGGGTTCCCATCTGGTGAACGCCTTTGCAT CCCAACTCACGTGCCTTCAC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPSQRTGNNQQAVAKVIKGQTIWPYTDFYFAGWGLASNKYHLTCRRGYNSLVALSGLATKAEGSTIGLAQTTLKKQRDRP SEAALLAGISNHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAE EVHRQLLEANSKVSLATIYRTLRLLVDMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAA ERIGFQLIESTLNVRALCPSCQRPSTTNVH
Sequences:
>Translated_270_residues MPSQRTGNNQQAVAKVIKGQTIWPYTDFYFAGWGLASNKYHLTCRRGYNSLVALSGLATKAEGSTIGLAQTTLKKQRDRP SEAALLAGISNHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAE EVHRQLLEANSKVSLATIYRTLRLLVDMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAA ERIGFQLIESTLNVRALCPSCQRPSTTNVH >Mature_269_residues PSQRTGNNQQAVAKVIKGQTIWPYTDFYFAGWGLASNKYHLTCRRGYNSLVALSGLATKAEGSTIGLAQTTLKKQRDRPS EAALLAGISNHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAEE VHRQLLEANSKVSLATIYRTLRLLVDMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAAE RIGFQLIESTLNVRALCPSCQRPSTTNVH
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates genes involved in iron scavenging or photosynthetic electron transport [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=129, Percent_Identity=28.6821705426357, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 29771; Mature: 29640
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSQRTGNNQQAVAKVIKGQTIWPYTDFYFAGWGLASNKYHLTCRRGYNSLVALSGLATK CCCCCCCCCHHHHHHHHCCCEECCCCCHHEECCCCCCCCEEEEEECCCCCEEHHHCCCCC AEGSTIGLAQTTLKKQRDRPSEAALLAGISNHQLRQSLSLAVTVEKCIAEVALPTSSSLA CCCCEECHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAEEVHRQLLEANSKVSLATIYR HHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHH TLRLLVDMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAA HHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH ERIGFQLIESTLNVRALCPSCQRPSTTNVH HHHHHHHHHHHHHHHEECCCCCCCCCCCCC >Mature Secondary Structure PSQRTGNNQQAVAKVIKGQTIWPYTDFYFAGWGLASNKYHLTCRRGYNSLVALSGLATK CCCCCCCCHHHHHHHHCCCEECCCCCHHEECCCCCCCCEEEEEECCCCCEEHHHCCCCC AEGSTIGLAQTTLKKQRDRPSEAALLAGISNHQLRQSLSLAVTVEKCIAEVALPTSSSLA CCCCEECHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAEEVHRQLLEANSKVSLATIYR HHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHH TLRLLVDMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAA HHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH ERIGFQLIESTLNVRALCPSCQRPSTTNVH HHHHHHHHHHHHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704986 [H]