Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863125

Identifier: 33863125

GI number: 33863125

Start: 932531

End: 933673

Strand: Direct

Name: 33863125

Synonym: PMT0853

Alternate gene names: NA

Gene position: 932531-933673 (Clockwise)

Preceding gene: 33863123

Following gene: 33863129

Centisome position: 38.68

GC content: 42.96

Gene sequence:

>1143_bases
GTGTTAAAGAAACAGGTTCGAGTTAATTACAAAATGGGCAAGAATCCCTTGCATCGCGCCTTCGACTTGCTAACAGGGCA
ATGGTCTATTTTTTTAGAACAACCTGTTCCAATTGAGGTGCTTGATGAGGAACGCATTGCTAACTCTTTACCTTCCTTTG
GCTTCTTTGTTTTACTTATCACATCAACAATAATCGCAACCTTTGGACTGATTGCCAACAACACTGCCGTTGTGATTGGA
GCCATGATCGTGGCTCCGTTAATGAATCCAATCTTGAGCATGGCGTATGGGATATCAATTGCAAGCAGCCTGTTGATCCG
ACGATCATTAGTGACCTTGATCATAGGTACTGGAGTCGTTGTTATGACAGCAGCTTTAATAGCAGCATGCATGCCAATAA
GAGTCTTAGGTTCAGAGATACTGGCTCGTACATCACCAAATCTGATCGACCTGCTAGTGGCTATTGCGGCCGGAATAGCT
GGTGCTTTTTCTCTAACCCGCAAGCGAATTGCGAGTTCTATAGCTGGGGTCGCAATCGCCGTTGCGCTTGTGCCTCCACT
TTGCGTTAGTGGCATTGGGTTGACGCTTGATCCAGAGATCAATGCCAAATTTGCTAGAGGAGTAATAAGGGGGCTCAACC
ATGAGGTTGCTACAGGGTCGTTCATACTTTTTCTGGCCAACCTTATAGGCATCACCTTTGCCGCTTCACTGACCTTTCTA
AGTCAGTCCTATGGATCGATCAAGCGCTCATGGCTAGCATTATTAGCATGGTTTGCACTGATCATTCTTATTTGCATCCC
TCTAAATTCCTCCTTAAGAAAGTTCTTCATTACAAAGAAGATTGAGATGGAACTCTCAACCATCGGGGCAACTCAACAAG
AGCAAGGAGCAACAAATATAAAAATATCAGGAATTAAGCAGAAGATGCAGATACGCTATATGTATGTGAATTTAAAAGAA
GATCGTGCTGTTCTAGATCTGGTACTCAATGTCCCAGAAGGCACACTGACAGAGGAAAAAGTAACCTCTATTAATAAAAT
ACTGTTTGATTCAATAAAAGAGTTTGGGATTAGACAACTCGATGTAGACACAAGAATCGTTCCTTCACGAGTTCATCAGT
ACAGGGAGACTCTTAAGCAATAA

Upstream 100 bases:

>100_bases
ACGAAAAGAAGAATGGAGATACACAGGCAAATAAAACAAGCAAATGGGTTAAATGTATTAAAAAGTTTCTAGGAGATGAA
ATTTGAACAGGGATAGCATA

Downstream 100 bases:

>100_bases
ATTCATTAGGCTGCAAATTGAGGGATTAGATATTAAATATTTCAAGAAGAATCAGACCATTGCATCTGAATATGCTACAA
CTGACTGAACATTACTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLKKQVRVNYKMGKNPLHRAFDLLTGQWSIFLEQPVPIEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIG
AMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVMTAALIAACMPIRVLGSEILARTSPNLIDLLVAIAAGIA
GAFSLTRKRIASSIAGVAIAVALVPPLCVSGIGLTLDPEINAKFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFL
SQSYGSIKRSWLALLAWFALIILICIPLNSSLRKFFITKKIEMELSTIGATQQEQGATNIKISGIKQKMQIRYMYVNLKE
DRAVLDLVLNVPEGTLTEEKVTSINKILFDSIKEFGIRQLDVDTRIVPSRVHQYRETLKQ

Sequences:

>Translated_380_residues
MLKKQVRVNYKMGKNPLHRAFDLLTGQWSIFLEQPVPIEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIG
AMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVMTAALIAACMPIRVLGSEILARTSPNLIDLLVAIAAGIA
GAFSLTRKRIASSIAGVAIAVALVPPLCVSGIGLTLDPEINAKFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFL
SQSYGSIKRSWLALLAWFALIILICIPLNSSLRKFFITKKIEMELSTIGATQQEQGATNIKISGIKQKMQIRYMYVNLKE
DRAVLDLVLNVPEGTLTEEKVTSINKILFDSIKEFGIRQLDVDTRIVPSRVHQYRETLKQ
>Mature_380_residues
MLKKQVRVNYKMGKNPLHRAFDLLTGQWSIFLEQPVPIEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIG
AMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVMTAALIAACMPIRVLGSEILARTSPNLIDLLVAIAAGIA
GAFSLTRKRIASSIAGVAIAVALVPPLCVSGIGLTLDPEINAKFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFL
SQSYGSIKRSWLALLAWFALIILICIPLNSSLRKFFITKKIEMELSTIGATQQEQGATNIKISGIKQKMQIRYMYVNLKE
DRAVLDLVLNVPEGTLTEEKVTSINKILFDSIKEFGIRQLDVDTRIVPSRVHQYRETLKQ

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19921100, Length=155, Percent_Identity=30.3225806451613, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 41407; Mature: 41407

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKQVRVNYKMGKNPLHRAFDLLTGQWSIFLEQPVPIEVLDEERIANSLPSFGFFVLLI
CCCCCEEEEHCCCCCHHHHHHHHHCCCEEEEECCCCCCEECCHHHHHHCCCHHHHHHHHH
TSTIIATFGLIANNTAVVIGAMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VMTAALIAACMPIRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIASSIAGVAIA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVPPLCVSGIGLTLDPEINAKFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFL
HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQSYGSIKRSWLALLAWFALIILICIPLNSSLRKFFITKKIEMELSTIGATQQEQGATNI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCE
KISGIKQKMQIRYMYVNLKEDRAVLDLVLNVPEGTLTEEKVTSINKILFDSIKEFGIRQL
EEECHHHHEEEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
DVDTRIVPSRVHQYRETLKQ
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKKQVRVNYKMGKNPLHRAFDLLTGQWSIFLEQPVPIEVLDEERIANSLPSFGFFVLLI
CCCCCEEEEHCCCCCHHHHHHHHHCCCEEEEECCCCCCEECCHHHHHHCCCHHHHHHHHH
TSTIIATFGLIANNTAVVIGAMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VMTAALIAACMPIRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIASSIAGVAIA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVPPLCVSGIGLTLDPEINAKFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFL
HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQSYGSIKRSWLALLAWFALIILICIPLNSSLRKFFITKKIEMELSTIGATQQEQGATNI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCE
KISGIKQKMQIRYMYVNLKEDRAVLDLVLNVPEGTLTEEKVTSINKILFDSIKEFGIRQL
EEECHHHHEEEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
DVDTRIVPSRVHQYRETLKQ
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]