| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862985
Identifier: 33862985
GI number: 33862985
Start: 770025
End: 770837
Strand: Reverse
Name: 33862985
Synonym: PMT0713
Alternate gene names: NA
Gene position: 770837-770025 (Counterclockwise)
Preceding gene: 33862987
Following gene: 33862982
Centisome position: 31.97
GC content: 45.88
Gene sequence:
>813_bases ATGATCAAGACTCTTTTCGGACTCCTACAAACACTCAAAAGAGGTCTTCGACTAACCGACTTTGTAGTCCTGGCTTCGCT TTTCTTGGTTCTCATGACAGAGAATTATGGCCGGCAGGCAAGCCAGACAAGTCAATCACCACCGCTGAATATTGCAACCG TTAATCACCTTGATCCAACCGATTTCAGAGCAGAAGAGCTCAGATATCTTCAAAAACGTTTCGGGGTACATGGCCCTCAG ACGCCTTTAGCTCAGTTGTTCACACAAGGAATTGATCACCTCCAGCCACTGCGAGCTCAGACAGTCAATCGACTGGATGA ATTAAAACCTGTGATCGTGCGCGAGTCCAAGCGATACCGCGTCAACCCAATGCTGGTCACAGCGATCCTCTTTGATGAAA TTCAGCATTCAAAACCAGGCGAAAACATCCCTTTTGTGGCTCATTCCGGTCTATTGAAGACCCATGGGCCAGCCCAACTA GGCATCTCTGAACTCATCCATCAAAAACGTTTGCCTCAGCATCCAACGGCAGAACAAATTTCAAGTGCTCGTAATTTACT TCTCAATCCAGAATCTAATATTGAGTTACTTGCAGGAAAGATTGCGCGTCTAAAGGATGACTTAGGCTTACCTTCTAATG CCTTAATCCAAGCTAGTCGCTCTTATAAACATGCCAAGGCGATCGCCACACTGGCTTATCTTCATAATGGCAAGCTTGAC TATCCCGCAAGAATTCTTCGTTATATGCAAGACCCTGAACTACATGGTCTGATTTATTCCCAACGTTCTTCAGCCCAGCT GCCCTTAATCTGA
Upstream 100 bases:
>100_bases CCGGGAAACTCATCAGCTGATGCACGTCGCTCACAGCTCGAAACGATCCACGATCAAAATGCCTGCTCATTTTCTCAGAC ACTCAGGCTAACCTCGCGCG
Downstream 100 bases:
>100_bases GGGATTGCTACTTACACAAAGATAACCAATCGCCGCTAGTCTTCGCTGTAGATTTGACCAATCAAAACTACGGGGGTCTG ATCGCTCACCTGCTAAATCA
Product: DnaB-like helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MIKTLFGLLQTLKRGLRLTDFVVLASLFLVLMTENYGRQASQTSQSPPLNIATVNHLDPTDFRAEELRYLQKRFGVHGPQ TPLAQLFTQGIDHLQPLRAQTVNRLDELKPVIVRESKRYRVNPMLVTAILFDEIQHSKPGENIPFVAHSGLLKTHGPAQL GISELIHQKRLPQHPTAEQISSARNLLLNPESNIELLAGKIARLKDDLGLPSNALIQASRSYKHAKAIATLAYLHNGKLD YPARILRYMQDPELHGLIYSQRSSAQLPLI
Sequences:
>Translated_270_residues MIKTLFGLLQTLKRGLRLTDFVVLASLFLVLMTENYGRQASQTSQSPPLNIATVNHLDPTDFRAEELRYLQKRFGVHGPQ TPLAQLFTQGIDHLQPLRAQTVNRLDELKPVIVRESKRYRVNPMLVTAILFDEIQHSKPGENIPFVAHSGLLKTHGPAQL GISELIHQKRLPQHPTAEQISSARNLLLNPESNIELLAGKIARLKDDLGLPSNALIQASRSYKHAKAIATLAYLHNGKLD YPARILRYMQDPELHGLIYSQRSSAQLPLI >Mature_270_residues MIKTLFGLLQTLKRGLRLTDFVVLASLFLVLMTENYGRQASQTSQSPPLNIATVNHLDPTDFRAEELRYLQKRFGVHGPQ TPLAQLFTQGIDHLQPLRAQTVNRLDELKPVIVRESKRYRVNPMLVTAILFDEIQHSKPGENIPFVAHSGLLKTHGPAQL GISELIHQKRLPQHPTAEQISSARNLLLNPESNIELLAGKIARLKDDLGLPSNALIQASRSYKHAKAIATLAYLHNGKLD YPARILRYMQDPELHGLIYSQRSSAQLPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30331; Mature: 30331
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTLFGLLQTLKRGLRLTDFVVLASLFLVLMTENYGRQASQTSQSPPLNIATVNHLDPT CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC DFRAEELRYLQKRFGVHGPQTPLAQLFTQGIDHLQPLRAQTVNRLDELKPVIVRESKRYR CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCEE VNPMLVTAILFDEIQHSKPGENIPFVAHSGLLKTHGPAQLGISELIHQKRLPQHPTAEQI CCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH SSARNLLLNPESNIELLAGKIARLKDDLGLPSNALIQASRSYKHAKAIATLAYLHNGKLD HHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YPARILRYMQDPELHGLIYSQRSSAQLPLI HHHHHHHHHCCCCHHHEEECCCCCCCCCCC >Mature Secondary Structure MIKTLFGLLQTLKRGLRLTDFVVLASLFLVLMTENYGRQASQTSQSPPLNIATVNHLDPT CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC DFRAEELRYLQKRFGVHGPQTPLAQLFTQGIDHLQPLRAQTVNRLDELKPVIVRESKRYR CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCEE VNPMLVTAILFDEIQHSKPGENIPFVAHSGLLKTHGPAQLGISELIHQKRLPQHPTAEQI CCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH SSARNLLLNPESNIELLAGKIARLKDDLGLPSNALIQASRSYKHAKAIATLAYLHNGKLD HHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YPARILRYMQDPELHGLIYSQRSSAQLPLI HHHHHHHHHCCCCHHHEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA